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Cluster: CGMR020543_CGC142

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_13478 k141_13478_3 2706 4505 - 9.B.33.1.1
STP k141_13478 k141_13478_4 4809 6194 + SBP_bac_1
TC k141_13478 k141_13478_5 6286 7152 + 3.A.1.1.7
TC k141_13478 k141_13478_6 7152 7988 + 3.A.1.1.45
CAZyme k141_13478 k141_13478_7 8010 10811 + GH38
pfam k141_13478 k141_13478_8 10861 11853 + HAD_2
pfam k141_13478 k141_13478_9 11898 12839 + PMI_typeI_cat | MPI_cupin_dom
CAZyme k141_13478 k141_13478_10 12875 17968 + GH141
CAZyme k141_13478 k141_13478_11 18338 22612 + GH141
Gene ID: k141_13478_3
Type: TC
Location: 2706 - 4505 (-)
Gene ID: k141_13478_4
Type: STP
Location: 4809 - 6194 (+)
Gene ID: k141_13478_5
Type: TC
Location: 6286 - 7152 (+)
Gene ID: k141_13478_6
Type: TC
Location: 7152 - 7988 (+)
Gene ID: k141_13478_7
Type: CAZyme
Location: 8010 - 10811 (+)
Gene ID: k141_13478_8
Type: pfam
Location: 10861 - 11853 (+)
Gene ID: k141_13478_9
Type: pfam
Location: 11898 - 12839 (+)
Gene ID: k141_13478_10
Type: CAZyme
Location: 12875 - 17968 (+)
Gene ID: k141_13478_11
Type: CAZyme
Location: 18338 - 22612 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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