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Cluster: CGMR020543_CGC140

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_17562 k141_17562_35 39860 46513 + CBM32 | CBM67 | CBM67 | GH78
CAZyme k141_17562 k141_17562_36 46684 52197 + CBM67 | GH78
CAZyme k141_17562 k141_17562_37 52295 58525 + CBM67 | GH78
CAZyme k141_17562 k141_17562_38 58658 65683 + CBM67 | GH78
peptidase k141_17562 k141_17562_39 65858 67672 + C40.UPW
TC k141_17562 k141_17562_40 67918 69741 - 8.A.59.2.1
TF k141_17562 k141_17562_41 69738 71288 - HTH_AraC | HTH_AraC
TF k141_17562 k141_17562_42 71371 72822 - HTH_AraC
TC k141_17562 k141_17562_43 73124 74626 + 3.A.1.2.20
TC k141_17562 k141_17562_44 74648 75649 + 3.A.1.2.9
TC k141_17562 k141_17562_45 75652 76665 + 3.A.1.2.1
TC k141_17562 k141_17562_46 76738 77916 + 3.A.1.2.9
pfam k141_17562 k141_17562_47 78076 78387 + rhaM
pfam k141_17562 k141_17562_48 78552 79763 - Peripla_BP_4
TC k141_17562 k141_17562_49 79956 81215 - 3.A.1.2.2
TC k141_17562 k141_17562_50 81215 82219 - 3.A.1.2.9
TC k141_17562 k141_17562_51 82223 83731 - 3.A.1.2.20
TF k141_17562 k141_17562_52 83979 84833 + HTH_AraC | HTH_AraC
TC k141_17562 k141_17562_53 85427 86344 + 8.A.5.1.7
pfam k141_17562 k141_17562_54 86447 87856 - Pyridoxal_deC
CAZyme k141_17562 k141_17562_55 88130 89560 - GH29
CAZyme k141_17562 k141_17562_56 89545 90981 - CE20
NULL(UNKNOWN) k141_17562 k141_17562_57 91002 92645 - NULL(UNKNOWN)
[View Structural Homologs]
TF k141_17562 k141_17562_58 92649 93404 - HTH_AraC | HTH_AraC
TC k141_17562 k141_17562_59 93410 95227 - 8.A.59.2.1
TC k141_17562 k141_17562_60 95546 96535 + 3.A.1.1.10
TC k141_17562 k141_17562_61 96599 97486 + 3.A.1.1.10
STP k141_17562 k141_17562_62 97531 99180 + SBP_bac_1
CAZyme k141_17562 k141_17562_63 99337 101952 + CBM67 | GH78
CAZyme k141_17562 k141_17562_64 101979 104579 + GH106
CAZyme k141_17562 k141_17562_65 104605 106659 + GH42
TF k141_17562 k141_17562_66 106680 108308 + HTH_AraC | HTH_AraC
TC k141_17562 k141_17562_67 108400 110163 + 8.A.59.2.1
TC k141_17562 k141_17562_68 110270 111199 + 3.A.1.1.10
TC k141_17562 k141_17562_69 111211 112104 + 3.A.1.1.29
Gene ID: k141_17562_35
Type: CAZyme
Location: 39860 - 46513 (+)
Gene ID: k141_17562_36
Type: CAZyme
Location: 46684 - 52197 (+)
Gene ID: k141_17562_37
Type: CAZyme
Location: 52295 - 58525 (+)
Gene ID: k141_17562_38
Type: CAZyme
Location: 58658 - 65683 (+)
Gene ID: k141_17562_39
Type: peptidase
Location: 65858 - 67672 (+)
Gene ID: k141_17562_40
Type: TC
Location: 67918 - 69741 (-)
Gene ID: k141_17562_41
Type: TF
Location: 69738 - 71288 (-)
Gene ID: k141_17562_42
Type: TF
Location: 71371 - 72822 (-)
Gene ID: k141_17562_43
Type: TC
Location: 73124 - 74626 (+)
Gene ID: k141_17562_44
Type: TC
Location: 74648 - 75649 (+)
Gene ID: k141_17562_45
Type: TC
Location: 75652 - 76665 (+)
Gene ID: k141_17562_46
Type: TC
Location: 76738 - 77916 (+)
Gene ID: k141_17562_47
Type: pfam
Location: 78076 - 78387 (+)
Gene ID: k141_17562_48
Type: pfam
Location: 78552 - 79763 (-)
Gene ID: k141_17562_49
Type: TC
Location: 79956 - 81215 (-)
Gene ID: k141_17562_50
Type: TC
Location: 81215 - 82219 (-)
Gene ID: k141_17562_51
Type: TC
Location: 82223 - 83731 (-)
Gene ID: k141_17562_52
Type: TF
Location: 83979 - 84833 (+)
Gene ID: k141_17562_53
Type: TC
Location: 85427 - 86344 (+)
Gene ID: k141_17562_54
Type: pfam
Location: 86447 - 87856 (-)
Gene ID: k141_17562_55
Type: CAZyme
Location: 88130 - 89560 (-)
Gene ID: k141_17562_56
Type: CAZyme
Location: 89545 - 90981 (-)
Gene ID: k141_17562_57
Type:
Location: 91002 - 92645 (-)
Gene ID: k141_17562_58
Type: TF
Location: 92649 - 93404 (-)
Gene ID: k141_17562_59
Type: TC
Location: 93410 - 95227 (-)
Gene ID: k141_17562_60
Type: TC
Location: 95546 - 96535 (+)
Gene ID: k141_17562_61
Type: TC
Location: 96599 - 97486 (+)
Gene ID: k141_17562_62
Type: STP
Location: 97531 - 99180 (+)
Gene ID: k141_17562_63
Type: CAZyme
Location: 99337 - 101952 (+)
Gene ID: k141_17562_64
Type: CAZyme
Location: 101979 - 104579 (+)
Gene ID: k141_17562_65
Type: CAZyme
Location: 104605 - 106659 (+)
Gene ID: k141_17562_66
Type: TF
Location: 106680 - 108308 (+)
Gene ID: k141_17562_67
Type: TC
Location: 108400 - 110163 (+)
Gene ID: k141_17562_68
Type: TC
Location: 110270 - 111199 (+)
Gene ID: k141_17562_69
Type: TC
Location: 111211 - 112104 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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