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Cluster: CGMR020543_CGC139

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_17562 k141_17562_22 24390 25886 + 3.A.1.2.19
TC k141_17562 k141_17562_23 25914 26900 + 3.A.1.2.11
TC k141_17562 k141_17562_24 26897 27892 + 3.A.1.2.13
STP k141_17562 k141_17562_25 28021 29112 + Peripla_BP_1
CAZyme k141_17562 k141_17562_26 29189 30214 + GH179
pfam k141_17562 k141_17562_27 30321 31097 + adh_short | KR | adh_short_C2
pfam k141_17562 k141_17562_28 31116 31883 + adh_short | KR | adh_short_C2
CAZyme k141_17562 k141_17562_29 32265 32975 + CE14
NULL(UNKNOWN) k141_17562 k141_17562_30 33026 33982 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_17562 k141_17562_31 34174 35223 + GH179
Gene ID: k141_17562_22
Type: TC
Location: 24390 - 25886 (+)
Gene ID: k141_17562_23
Type: TC
Location: 25914 - 26900 (+)
Gene ID: k141_17562_24
Type: TC
Location: 26897 - 27892 (+)
Gene ID: k141_17562_25
Type: STP
Location: 28021 - 29112 (+)
Gene ID: k141_17562_26
Type: CAZyme
Location: 29189 - 30214 (+)
Gene ID: k141_17562_27
Type: pfam
Location: 30321 - 31097 (+)
Gene ID: k141_17562_28
Type: pfam
Location: 31116 - 31883 (+)
Gene ID: k141_17562_29
Type: CAZyme
Location: 32265 - 32975 (+)
Gene ID: k141_17562_30
Type:
Location: 33026 - 33982 (+)
Gene ID: k141_17562_31
Type: CAZyme
Location: 34174 - 35223 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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