Cluster: CGMR020543_CGC137
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR020543
- CGC Family ID: CGCFAM_02633
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_560 | k141_560_11 | 11313 | 13448 | - | GH3 |
| CAZyme | k141_560 | k141_560_12 | 13511 | 15856 | - | GH31_3 |
| TC | k141_560 | k141_560_13 | 16261 | 18063 | + | 8.A.59.2.1 |
| TF | k141_560 | k141_560_14 | 18067 | 19611 | + | HTH_AraC | HTH_AraC |
| pfam | k141_560 | k141_560_15 | 19768 | 20418 | - | Lipase_GDSL | Lipase_GDSL_2 |
| CAZyme | k141_560 | k141_560_16 | 20477 | 22495 | - | GH42 |
Gene ID: k141_560_11
Type: CAZyme
Location: 11313 - 13448 (-)
Type: CAZyme
Location: 11313 - 13448 (-)
Gene ID: k141_560_12
Type: CAZyme
Location: 13511 - 15856 (-)
Type: CAZyme
Location: 13511 - 15856 (-)
Gene ID: k141_560_13
Type: TC
Location: 16261 - 18063 (+)
Type: TC
Location: 16261 - 18063 (+)
Gene ID: k141_560_14
Type: TF
Location: 18067 - 19611 (+)
Type: TF
Location: 18067 - 19611 (+)
Gene ID: k141_560_15
Type: pfam
Location: 19768 - 20418 (-)
Type: pfam
Location: 19768 - 20418 (-)
Gene ID: k141_560_16
Type: CAZyme
Location: 20477 - 22495 (-)
Type: CAZyme
Location: 20477 - 22495 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella peoriensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.