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Cluster: CGMR020543_CGC136

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_7187 k141_7187_9 13863 15839 - GH127
pfam k141_7187 k141_7187_10 15976 16647 - Asp_Glu_race
TC k141_7187 k141_7187_11 17050 18807 + 8.A.59.2.1
TF k141_7187 k141_7187_12 18785 19855 + HTH_AraC | HTH_AraC
CAZyme k141_7187 k141_7187_13 19880 21241 - GH29
TC k141_7187 k141_7187_14 21263 23044 - 8.A.59.2.1
TF k141_7187 k141_7187_15 23056 24180 - HTH_AraC
TC k141_7187 k141_7187_16 24388 25347 + 3.A.1.1.10
TC k141_7187 k141_7187_17 25362 26300 + 3.A.1.1.29
STP k141_7187 k141_7187_18 26340 27941 + SBP_bac_1
sulfatase k141_7187 k141_7187_19 27943 29418 + S1_26
CAZyme k141_7187 k141_7187_20 29499 34889 + GH111
CAZyme k141_7187 k141_7187_21 35053 36699 + GH123
TC k141_7187 k141_7187_22 36843 38255 + 3.A.1.1.21
TC k141_7187 k141_7187_23 38454 39350 + 3.A.1.1.7
TC k141_7187 k141_7187_24 39362 40207 + 3.A.1.1.18
Gene ID: k141_7187_9
Type: CAZyme
Location: 13863 - 15839 (-)
Gene ID: k141_7187_10
Type: pfam
Location: 15976 - 16647 (-)
Gene ID: k141_7187_11
Type: TC
Location: 17050 - 18807 (+)
Gene ID: k141_7187_12
Type: TF
Location: 18785 - 19855 (+)
Gene ID: k141_7187_13
Type: CAZyme
Location: 19880 - 21241 (-)
Gene ID: k141_7187_14
Type: TC
Location: 21263 - 23044 (-)
Gene ID: k141_7187_15
Type: TF
Location: 23056 - 24180 (-)
Gene ID: k141_7187_16
Type: TC
Location: 24388 - 25347 (+)
Gene ID: k141_7187_17
Type: TC
Location: 25362 - 26300 (+)
Gene ID: k141_7187_18
Type: STP
Location: 26340 - 27941 (+)
Gene ID: k141_7187_19
Type: sulfatase
Location: 27943 - 29418 (+)
Gene ID: k141_7187_20
Type: CAZyme
Location: 29499 - 34889 (+)
Gene ID: k141_7187_21
Type: CAZyme
Location: 35053 - 36699 (+)
Gene ID: k141_7187_22
Type: TC
Location: 36843 - 38255 (+)
Gene ID: k141_7187_23
Type: TC
Location: 38454 - 39350 (+)
Gene ID: k141_7187_24
Type: TC
Location: 39362 - 40207 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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