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Cluster: CGMR020543_CGC129

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_18264 k141_18264_14 14524 16617 - GH52
TC k141_18264 k141_18264_15 16748 18520 - 3.A.1.1.29
TC k141_18264 k141_18264_16 18572 19474 - 3.A.1.1.29
TC k141_18264 k141_18264_17 19487 20413 - 3.A.1.1.29
STP k141_18264 k141_18264_18 20674 22476 - HATPase_c | dCache_1
TF k141_18264 k141_18264_19 22534 24093 - HTH_AraC
CAZyme k141_18264 k141_18264_20 24321 25766 - GH29
NULL(UNKNOWN) k141_18264 k141_18264_21 25781 26869 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_18264 k141_18264_22 26873 29224 - GH3
Gene ID: k141_18264_14
Type: CAZyme
Location: 14524 - 16617 (-)
Gene ID: k141_18264_15
Type: TC
Location: 16748 - 18520 (-)
Gene ID: k141_18264_16
Type: TC
Location: 18572 - 19474 (-)
Gene ID: k141_18264_17
Type: TC
Location: 19487 - 20413 (-)
Gene ID: k141_18264_18
Type: STP
Location: 20674 - 22476 (-)
Gene ID: k141_18264_19
Type: TF
Location: 22534 - 24093 (-)
Gene ID: k141_18264_20
Type: CAZyme
Location: 24321 - 25766 (-)
Gene ID: k141_18264_21
Type:
Location: 25781 - 26869 (-)
Gene ID: k141_18264_22
Type: CAZyme
Location: 26873 - 29224 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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