Cluster: CGMR020543_CGC114
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR020543
- CGC Family ID: CGCFAM_02382
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_29601 | k141_29601_3 | 2480 | 3403 | + | 3.A.1.1.10 |
| TC | k141_29601 | k141_29601_4 | 3508 | 4410 | + | 3.A.1.1.29 |
| TC | k141_29601 | k141_29601_5 | 4434 | 6254 | + | 9.B.33.1.1 |
| TF | k141_29601 | k141_29601_6 | 6251 | 7840 | + | HTH_AraC |
| CAZyme | k141_29601 | k141_29601_7 | 7929 | 10214 | + | GH3 |
| CAZyme | k141_29601 | k141_29601_8 | 10389 | 11477 | + | GH106 |
Gene ID: k141_29601_3
Type: TC
Location: 2480 - 3403 (+)
Type: TC
Location: 2480 - 3403 (+)
Gene ID: k141_29601_4
Type: TC
Location: 3508 - 4410 (+)
Type: TC
Location: 3508 - 4410 (+)
Gene ID: k141_29601_5
Type: TC
Location: 4434 - 6254 (+)
Type: TC
Location: 4434 - 6254 (+)
Gene ID: k141_29601_6
Type: TF
Location: 6251 - 7840 (+)
Type: TF
Location: 6251 - 7840 (+)
Gene ID: k141_29601_7
Type: CAZyme
Location: 7929 - 10214 (+)
Type: CAZyme
Location: 7929 - 10214 (+)
Gene ID: k141_29601_8
Type: CAZyme
Location: 10389 - 11477 (+)
Type: CAZyme
Location: 10389 - 11477 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella peoriensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.