Cluster: CGMR020543_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR020543
- CGC Family ID: CGCFAM_00504
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_8298 | k141_8298_18 | 26636 | 29125 | - | GH38 |
| pfam | k141_8298 | k141_8298_19 | 29517 | 30419 | - | PDDEXK_2 |
| pfam | k141_8298 | k141_8298_20 | 30812 | 33412 | - | FtsX | FtsX |
| TC | k141_8298 | k141_8298_21 | 33425 | 34093 | - | 3.A.1.122.14 |
| STP | k141_8298 | k141_8298_22 | 34264 | 35295 | - | HATPase_c | HisKA |
| TF | k141_8298 | k141_8298_23 | 35285 | 36019 | - | Trans_reg_C |
| CAZyme | k141_8298 | k141_8298_24 | 36019 | 36891 | - | GH43_17 |
Gene ID: k141_8298_18
Type: CAZyme
Location: 26636 - 29125 (-)
Type: CAZyme
Location: 26636 - 29125 (-)
Gene ID: k141_8298_19
Type: pfam
Location: 29517 - 30419 (-)
Type: pfam
Location: 29517 - 30419 (-)
Gene ID: k141_8298_20
Type: pfam
Location: 30812 - 33412 (-)
Type: pfam
Location: 30812 - 33412 (-)
Gene ID: k141_8298_21
Type: TC
Location: 33425 - 34093 (-)
Type: TC
Location: 33425 - 34093 (-)
Gene ID: k141_8298_22
Type: STP
Location: 34264 - 35295 (-)
Type: STP
Location: 34264 - 35295 (-)
Gene ID: k141_8298_23
Type: TF
Location: 35285 - 36019 (-)
Type: TF
Location: 35285 - 36019 (-)
Gene ID: k141_8298_24
Type: CAZyme
Location: 36019 - 36891 (-)
Type: CAZyme
Location: 36019 - 36891 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella peoriensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.