Cluster: CGMR020543_CGC108
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR020543
- CGC Family ID: CGCFAM_04609
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_532 | k141_532_15 | 24448 | 26193 | - | 8.A.59.2.1 |
| STP | k141_532 | k141_532_16 | 26354 | 27841 | + | SBP_bac_1 |
| TC | k141_532 | k141_532_17 | 27919 | 28842 | + | 3.A.1.1.11 |
| TC | k141_532 | k141_532_18 | 28857 | 29687 | + | 3.A.1.1.36 |
| CAZyme | k141_532 | k141_532_19 | 29903 | 30898 | + | GH117 |
| CAZyme | k141_532 | k141_532_20 | 30919 | 32061 | + | GH88 |
Gene ID: k141_532_15
Type: TC
Location: 24448 - 26193 (-)
Type: TC
Location: 24448 - 26193 (-)
Gene ID: k141_532_16
Type: STP
Location: 26354 - 27841 (+)
Type: STP
Location: 26354 - 27841 (+)
Gene ID: k141_532_17
Type: TC
Location: 27919 - 28842 (+)
Type: TC
Location: 27919 - 28842 (+)
Gene ID: k141_532_18
Type: TC
Location: 28857 - 29687 (+)
Type: TC
Location: 28857 - 29687 (+)
Gene ID: k141_532_19
Type: CAZyme
Location: 29903 - 30898 (+)
Type: CAZyme
Location: 29903 - 30898 (+)
Gene ID: k141_532_20
Type: CAZyme
Location: 30919 - 32061 (+)
Type: CAZyme
Location: 30919 - 32061 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella peoriensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.