Cluster: CGMR020543_CGC107
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR020543
- CGC Family ID: CGCFAM_04985
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_532 | k141_532_3 | 5572 | 7308 | - | 8.A.59.2.1 |
| TC | k141_532 | k141_532_4 | 7574 | 8884 | + | 3.A.1.1.28 |
| TC | k141_532 | k141_532_5 | 9071 | 10009 | + | 3.A.1.1.25 |
| TC | k141_532 | k141_532_6 | 10006 | 10839 | + | 3.A.1.1.18 |
| CAZyme | k141_532 | k141_532_7 | 10871 | 13405 | + | GH2 |
| CAZyme | k141_532 | k141_532_8 | 13424 | 16573 | + | GH38 |
Gene ID: k141_532_3
Type: TC
Location: 5572 - 7308 (-)
Type: TC
Location: 5572 - 7308 (-)
Gene ID: k141_532_4
Type: TC
Location: 7574 - 8884 (+)
Type: TC
Location: 7574 - 8884 (+)
Gene ID: k141_532_5
Type: TC
Location: 9071 - 10009 (+)
Type: TC
Location: 9071 - 10009 (+)
Gene ID: k141_532_6
Type: TC
Location: 10006 - 10839 (+)
Type: TC
Location: 10006 - 10839 (+)
Gene ID: k141_532_7
Type: CAZyme
Location: 10871 - 13405 (+)
Type: CAZyme
Location: 10871 - 13405 (+)
Gene ID: k141_532_8
Type: CAZyme
Location: 13424 - 16573 (+)
Type: CAZyme
Location: 13424 - 16573 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella peoriensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.