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Cluster: CGMR020543_CGC101

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_17897 k141_17897_2 619 2070 - 4.A.1.1.7
STP k141_17897 k141_17897_3 2147 2395 - PTS-HPr
TC k141_17897 k141_17897_4 2406 2885 - 4.A.1.2.2
pfam k141_17897 k141_17897_5 2904 3731 - PRD | PRD | CAT_RBD
CAZyme k141_17897 k141_17897_6 4030 6090 - GH42
TF k141_17897 k141_17897_7 6181 7212 - LacI
TC k141_17897 k141_17897_8 7322 8128 - 3.A.1.1.4
TC k141_17897 k141_17897_9 8121 9002 - 3.A.1.1.4
TC k141_17897 k141_17897_10 9183 10535 - 3.A.1.1.4
Gene ID: k141_17897_2
Type: TC
Location: 619 - 2070 (-)
Gene ID: k141_17897_3
Type: STP
Location: 2147 - 2395 (-)
Gene ID: k141_17897_4
Type: TC
Location: 2406 - 2885 (-)
Gene ID: k141_17897_5
Type: pfam
Location: 2904 - 3731 (-)
Gene ID: k141_17897_6
Type: CAZyme
Location: 4030 - 6090 (-)
Gene ID: k141_17897_7
Type: TF
Location: 6181 - 7212 (-)
Gene ID: k141_17897_8
Type: TC
Location: 7322 - 8128 (-)
Gene ID: k141_17897_9
Type: TC
Location: 8121 - 9002 (-)
Gene ID: k141_17897_10
Type: TC
Location: 9183 - 10535 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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