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Cluster: CGMR020485_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_232670 k141_232670_13 16813 17478 - 3.A.1.12.4
TC k141_232670 k141_232670_14 17479 18414 - 3.A.1.12.4
TC k141_232670 k141_232670_15 18414 19052 - 3.A.1.12.3
TC k141_232670 k141_232670_16 19052 20203 - 3.A.1.12.4
CAZyme k141_232670 k141_232670_17 21512 23908 - GT35
CAZyme k141_232670 k141_232670_18 23934 25367 - GT5
pfam k141_232670 k141_232670_19 25364 26497 - NTP_transferase | Hexapep_GlmU
pfam k141_232670 k141_232670_20 26487 27626 - NTP_transferase | NTP_transf_3 | Hexapep_GlmU
CAZyme k141_232670 k141_232670_21 27685 29568 - CBM48 | GH13_9
CAZyme k141_232670 k141_232670_22 29719 31917 - GH13_14
TC k141_232670 k141_232670_23 32146 33099 - 3.A.1.2.12
TC k141_232670 k141_232670_24 33096 34160 - 3.A.1.2.12
TC k141_232670 k141_232670_25 34153 35688 - 3.A.1.2.12
TC k141_232670 k141_232670_26 36015 37073 - 3.A.1.2.12
Gene ID: k141_232670_13
Type: TC
Location: 16813 - 17478 (-)
Gene ID: k141_232670_14
Type: TC
Location: 17479 - 18414 (-)
Gene ID: k141_232670_15
Type: TC
Location: 18414 - 19052 (-)
Gene ID: k141_232670_16
Type: TC
Location: 19052 - 20203 (-)
Gene ID: k141_232670_17
Type: CAZyme
Location: 21512 - 23908 (-)
Gene ID: k141_232670_18
Type: CAZyme
Location: 23934 - 25367 (-)
Gene ID: k141_232670_19
Type: pfam
Location: 25364 - 26497 (-)
Gene ID: k141_232670_20
Type: pfam
Location: 26487 - 27626 (-)
Gene ID: k141_232670_21
Type: CAZyme
Location: 27685 - 29568 (-)
Gene ID: k141_232670_22
Type: CAZyme
Location: 29719 - 31917 (-)
Gene ID: k141_232670_23
Type: TC
Location: 32146 - 33099 (-)
Gene ID: k141_232670_24
Type: TC
Location: 33096 - 34160 (-)
Gene ID: k141_232670_25
Type: TC
Location: 34153 - 35688 (-)
Gene ID: k141_232670_26
Type: TC
Location: 36015 - 37073 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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