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Cluster: CGMR020379_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_437233 k141_437233_4 2390 3418 - GT2
CAZyme k141_437233 k141_437233_5 3467 4267 - GT2
pfam k141_437233 k141_437233_6 4264 5172 - 3Beta_HSD | Epimerase | RmlD_sub_bind
TC k141_437233 k141_437233_7 5191 5850 - 9.B.18.1.1
CAZyme k141_437233 k141_437233_8 5853 6875 - GT2
CAZyme k141_437233 k141_437233_9 6862 8235 - GT4
NULL(UNKNOWN) k141_437233 k141_437233_10 8313 9932 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_437233 k141_437233_11 10008 11369 - GT4
CAZyme k141_437233 k141_437233_12 11437 12294 - GT2
CAZyme k141_437233 k141_437233_13 12367 13143 - GT2
TC k141_437233 k141_437233_14 13140 14606 - 9.B.18.1.3
CAZyme k141_437233 k141_437233_15 14697 15452 - GT2
Gene ID: k141_437233_4
Type: CAZyme
Location: 2390 - 3418 (-)
Gene ID: k141_437233_5
Type: CAZyme
Location: 3467 - 4267 (-)
Gene ID: k141_437233_6
Type: pfam
Location: 4264 - 5172 (-)
Gene ID: k141_437233_7
Type: TC
Location: 5191 - 5850 (-)
Gene ID: k141_437233_8
Type: CAZyme
Location: 5853 - 6875 (-)
Gene ID: k141_437233_9
Type: CAZyme
Location: 6862 - 8235 (-)
Gene ID: k141_437233_10
Type:
Location: 8313 - 9932 (-)
Gene ID: k141_437233_11
Type: CAZyme
Location: 10008 - 11369 (-)
Gene ID: k141_437233_12
Type: CAZyme
Location: 11437 - 12294 (-)
Gene ID: k141_437233_13
Type: CAZyme
Location: 12367 - 13143 (-)
Gene ID: k141_437233_14
Type: TC
Location: 13140 - 14606 (-)
Gene ID: k141_437233_15
Type: CAZyme
Location: 14697 - 15452 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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