Cluster: CGMR020379_CGC36
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR020379
- CGC Family ID: CGCFAM_01040
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_437000 | k141_437000_2 | 1192 | 2418 | + | GH29 |
| TF | k141_437000 | k141_437000_3 | 2563 | 4116 | + | HTH_AraC |
| NULL(UNKNOWN) | k141_437000 | k141_437000_4 | 4088 | 4951 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_437000 | k141_437000_5 | 4951 | 5910 | + | 8.A.59.2.1 |
| TC | k141_437000 | k141_437000_6 | 5923 | 6867 | + | 3.A.1.1.9 |
| TC | k141_437000 | k141_437000_7 | 6881 | 7759 | + | 3.A.1.1.23 |
Gene ID: k141_437000_2
Type: CAZyme
Location: 1192 - 2418 (+)
Type: CAZyme
Location: 1192 - 2418 (+)
Gene ID: k141_437000_3
Type: TF
Location: 2563 - 4116 (+)
Type: TF
Location: 2563 - 4116 (+)
Gene ID: k141_437000_4
Type:
Location: 4088 - 4951 (+)
Type:
Location: 4088 - 4951 (+)
Gene ID: k141_437000_5
Type: TC
Location: 4951 - 5910 (+)
Type: TC
Location: 4951 - 5910 (+)
Gene ID: k141_437000_6
Type: TC
Location: 5923 - 6867 (+)
Type: TC
Location: 5923 - 6867 (+)
Gene ID: k141_437000_7
Type: TC
Location: 6881 - 7759 (+)
Type: TC
Location: 6881 - 7759 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp947588205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.