Cluster: CGMR020379_CGC33
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR020379
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_987962 | k141_987962_26 | 28379 | 29863 | + | 2.A.50.2.1 |
| NULL(UNKNOWN) | k141_987962 | k141_987962_27 | 29917 | 31335 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_987962 | k141_987962_28 | 31351 | 32403 | - | 4.D.2.1.5 |
| NULL(UNKNOWN) | k141_987962 | k141_987962_29 | 32393 | 33031 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_987962 | k141_987962_30 | 33111 | 34148 | - | GT2 |
| pfam | k141_987962 | k141_987962_31 | 34385 | 35293 | + | ECF-ribofla_trS | ECF_trnsprt |
| pfam | k141_987962 | k141_987962_32 | 35369 | 36331 | - | DUF4097 |
| CAZyme | k141_987962 | k141_987962_33 | 36422 | 37732 | - | GH13_20 |
| pfam | k141_987962 | k141_987962_34 | 38125 | 40617 | - | DEAD_2 | Helicase_C_2 |
| NULL(UNKNOWN) | k141_987962 | k141_987962_35 | 40756 | 40980 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_987962 | k141_987962_36 | 41194 | 43224 | - | 3.A.1.134.9 |
| TC | k141_987962 | k141_987962_37 | 43221 | 44099 | - | 3.A.1.134.4 |
| STP | k141_987962 | k141_987962_38 | 44284 | 45363 | - | HATPase_c |
| TF | k141_987962 | k141_987962_39 | 45485 | 46162 | - | Trans_reg_C |
| TC | k141_987962 | k141_987962_40 | 46522 | 49206 | - | 3.A.3.5.15 |
Gene ID: k141_987962_26
Type: TC
Location: 28379 - 29863 (+)
Type: TC
Location: 28379 - 29863 (+)
Gene ID: k141_987962_27
Type:
Location: 29917 - 31335 (+)
Type:
Location: 29917 - 31335 (+)
Gene ID: k141_987962_28
Type: TC
Location: 31351 - 32403 (-)
Type: TC
Location: 31351 - 32403 (-)
Gene ID: k141_987962_29
Type:
Location: 32393 - 33031 (-)
Type:
Location: 32393 - 33031 (-)
Gene ID: k141_987962_30
Type: CAZyme
Location: 33111 - 34148 (-)
Type: CAZyme
Location: 33111 - 34148 (-)
Gene ID: k141_987962_31
Type: pfam
Location: 34385 - 35293 (+)
Type: pfam
Location: 34385 - 35293 (+)
Gene ID: k141_987962_32
Type: pfam
Location: 35369 - 36331 (-)
Type: pfam
Location: 35369 - 36331 (-)
Gene ID: k141_987962_33
Type: CAZyme
Location: 36422 - 37732 (-)
Type: CAZyme
Location: 36422 - 37732 (-)
Gene ID: k141_987962_34
Type: pfam
Location: 38125 - 40617 (-)
Type: pfam
Location: 38125 - 40617 (-)
Gene ID: k141_987962_35
Type:
Location: 40756 - 40980 (-)
Type:
Location: 40756 - 40980 (-)
Gene ID: k141_987962_36
Type: TC
Location: 41194 - 43224 (-)
Type: TC
Location: 41194 - 43224 (-)
Gene ID: k141_987962_37
Type: TC
Location: 43221 - 44099 (-)
Type: TC
Location: 43221 - 44099 (-)
Gene ID: k141_987962_38
Type: STP
Location: 44284 - 45363 (-)
Type: STP
Location: 44284 - 45363 (-)
Gene ID: k141_987962_39
Type: TF
Location: 45485 - 46162 (-)
Type: TF
Location: 45485 - 46162 (-)
Gene ID: k141_987962_40
Type: TC
Location: 46522 - 49206 (-)
Type: TC
Location: 46522 - 49206 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp947588205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.