Cluster: CGMR020379_CGC30
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR020379
- CGC Family ID: CGCFAM_00418
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_63099 | k141_63099_15 | 10811 | 13012 | - | 3.A.1.135.5 |
| pfam | k141_63099 | k141_63099_16 | 13047 | 13697 | - | DUF1854 |
| TC | k141_63099 | k141_63099_17 | 13836 | 16157 | - | 3.A.1.135.7 |
| TF | k141_63099 | k141_63099_18 | 16158 | 16997 | - | HTH_AraC | HTH_AraC |
| pfam | k141_63099 | k141_63099_19 | 17258 | 18100 | + | DegV |
| CAZyme | k141_63099 | k141_63099_20 | 18285 | 19643 | + | GT2 |
Gene ID: k141_63099_15
Type: TC
Location: 10811 - 13012 (-)
Type: TC
Location: 10811 - 13012 (-)
Gene ID: k141_63099_16
Type: pfam
Location: 13047 - 13697 (-)
Type: pfam
Location: 13047 - 13697 (-)
Gene ID: k141_63099_17
Type: TC
Location: 13836 - 16157 (-)
Type: TC
Location: 13836 - 16157 (-)
Gene ID: k141_63099_18
Type: TF
Location: 16158 - 16997 (-)
Type: TF
Location: 16158 - 16997 (-)
Gene ID: k141_63099_19
Type: pfam
Location: 17258 - 18100 (+)
Type: pfam
Location: 17258 - 18100 (+)
Gene ID: k141_63099_20
Type: CAZyme
Location: 18285 - 19643 (+)
Type: CAZyme
Location: 18285 - 19643 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp947588205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.