Cluster: CGMR020379_CGC24
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR020379
- CGC Family ID: CGCFAM_00039
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_1242024 | k141_1242024_3 | 1715 | 3106 | + | GT2 |
| CAZyme | k141_1242024 | k141_1242024_4 | 3129 | 4115 | + | GT2 |
| TC | k141_1242024 | k141_1242024_5 | 4335 | 5741 | + | 9.B.18.1.1 |
| pfam | k141_1242024 | k141_1242024_6 | 5813 | 7012 | + | LytR_cpsA_psr |
| CAZyme | k141_1242024 | k141_1242024_7 | 7137 | 8072 | + | GT2 |
| STP | k141_1242024 | k141_1242024_8 | 8198 | 9787 | + | AAA |
| STP | k141_1242024 | k141_1242024_9 | 10058 | 10276 | + | HMA |
| TC | k141_1242024 | k141_1242024_10 | 10286 | 12379 | + | 3.A.3.6.10 |
Gene ID: k141_1242024_3
Type: CAZyme
Location: 1715 - 3106 (+)
Type: CAZyme
Location: 1715 - 3106 (+)
Gene ID: k141_1242024_4
Type: CAZyme
Location: 3129 - 4115 (+)
Type: CAZyme
Location: 3129 - 4115 (+)
Gene ID: k141_1242024_5
Type: TC
Location: 4335 - 5741 (+)
Type: TC
Location: 4335 - 5741 (+)
Gene ID: k141_1242024_6
Type: pfam
Location: 5813 - 7012 (+)
Type: pfam
Location: 5813 - 7012 (+)
Gene ID: k141_1242024_7
Type: CAZyme
Location: 7137 - 8072 (+)
Type: CAZyme
Location: 7137 - 8072 (+)
Gene ID: k141_1242024_8
Type: STP
Location: 8198 - 9787 (+)
Type: STP
Location: 8198 - 9787 (+)
Gene ID: k141_1242024_9
Type: STP
Location: 10058 - 10276 (+)
Type: STP
Location: 10058 - 10276 (+)
Gene ID: k141_1242024_10
Type: TC
Location: 10286 - 12379 (+)
Type: TC
Location: 10286 - 12379 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp947588205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.