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Cluster: CGMR020379_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_736544 k141_736544_3 1058 3466 - GH94
CAZyme k141_736544 k141_736544_4 3450 4715 - GH28
CAZyme k141_736544 k141_736544_5 4733 7567 - GH105
pfam k141_736544 k141_736544_6 7678 9303 - DUF3502
TC k141_736544 k141_736544_7 9371 10252 - 3.A.1.1.29
TC k141_736544 k141_736544_8 10267 11196 - 3.A.1.1.9
TF k141_736544 k141_736544_9 11417 12625 + HTH_AraC
TC k141_736544 k141_736544_10 12615 14372 + 8.A.59.2.1
TC k141_736544 k141_736544_11 14388 15044 - 9.B.28.1.8
CAZyme k141_736544 k141_736544_12 15118 16692 - GH3
pfam k141_736544 k141_736544_13 16921 17730 + Peptidase_S9 | DLH | Abhydrolase_3 | Hydrolase_4 | BD-FAE
pfam k141_736544 k141_736544_14 17851 19044 + AAA_14 | DUF4143
TC k141_736544 k141_736544_15 19164 21803 - 4.A.2.1.17
pfam k141_736544 k141_736544_16 21997 22827 - GDPD
TC k141_736544 k141_736544_17 22957 24318 - 2.A.1.2.88
TC k141_736544 k141_736544_18 24547 26184 + 3.A.1.121.4
Gene ID: k141_736544_3
Type: CAZyme
Location: 1058 - 3466 (-)
Gene ID: k141_736544_4
Type: CAZyme
Location: 3450 - 4715 (-)
Gene ID: k141_736544_5
Type: CAZyme
Location: 4733 - 7567 (-)
Gene ID: k141_736544_6
Type: pfam
Location: 7678 - 9303 (-)
Gene ID: k141_736544_7
Type: TC
Location: 9371 - 10252 (-)
Gene ID: k141_736544_8
Type: TC
Location: 10267 - 11196 (-)
Gene ID: k141_736544_9
Type: TF
Location: 11417 - 12625 (+)
Gene ID: k141_736544_10
Type: TC
Location: 12615 - 14372 (+)
Gene ID: k141_736544_11
Type: TC
Location: 14388 - 15044 (-)
Gene ID: k141_736544_12
Type: CAZyme
Location: 15118 - 16692 (-)
Gene ID: k141_736544_13
Type: pfam
Location: 16921 - 17730 (+)
Gene ID: k141_736544_14
Type: pfam
Location: 17851 - 19044 (+)
Gene ID: k141_736544_15
Type: TC
Location: 19164 - 21803 (-)
Gene ID: k141_736544_16
Type: pfam
Location: 21997 - 22827 (-)
Gene ID: k141_736544_17
Type: TC
Location: 22957 - 24318 (-)
Gene ID: k141_736544_18
Type: TC
Location: 24547 - 26184 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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