Cluster: CGMR020379_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR020379
- CGC Family ID: CGCFAM_02009
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_90553 | k141_90553_1 | 1 | 945 | + | 3.A.1.1.10 |
| TC | k141_90553 | k141_90553_2 | 945 | 1820 | + | 3.A.1.1.29 |
| STP | k141_90553 | k141_90553_3 | 1833 | 3383 | + | SBP_bac_1 |
| CAZyme | k141_90553 | k141_90553_4 | 3507 | 6029 | + | GH2 |
| TF | k141_90553 | k141_90553_5 | 6036 | 7142 | + | GntR |
| CAZyme | k141_90553 | k141_90553_6 | 7148 | 8428 | + | GH125 |
Gene ID: k141_90553_1
Type: TC
Location: 1 - 945 (+)
Type: TC
Location: 1 - 945 (+)
Gene ID: k141_90553_2
Type: TC
Location: 945 - 1820 (+)
Type: TC
Location: 945 - 1820 (+)
Gene ID: k141_90553_3
Type: STP
Location: 1833 - 3383 (+)
Type: STP
Location: 1833 - 3383 (+)
Gene ID: k141_90553_4
Type: CAZyme
Location: 3507 - 6029 (+)
Type: CAZyme
Location: 3507 - 6029 (+)
Gene ID: k141_90553_5
Type: TF
Location: 6036 - 7142 (+)
Type: TF
Location: 6036 - 7142 (+)
Gene ID: k141_90553_6
Type: CAZyme
Location: 7148 - 8428 (+)
Type: CAZyme
Location: 7148 - 8428 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp947588205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.