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Cluster: CGMR020081_CGC54

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_6645 k141_6645_11 10295 12748 - GT35
pfam k141_6645 k141_6645_12 12811 15945 - tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | DUF5915
TF k141_6645 k141_6645_13 16473 16973 + MarR
TC k141_6645 k141_6645_14 16970 17593 + 2.A.115.2.14
TC k141_6645 k141_6645_15 17595 19322 + 3.A.1.135.6
TC k141_6645 k141_6645_16 19319 21163 + 3.A.1.135.6
pfam k141_6645 k141_6645_17 21229 21909 + CusB_dom_1 | HlyD_3 | HlyD_D23
TC k141_6645 k141_6645_18 21931 23103 + 2.A.6.2.39
Gene ID: k141_6645_11
Type: CAZyme
Location: 10295 - 12748 (-)
Gene ID: k141_6645_12
Type: pfam
Location: 12811 - 15945 (-)
Gene ID: k141_6645_13
Type: TF
Location: 16473 - 16973 (+)
Gene ID: k141_6645_14
Type: TC
Location: 16970 - 17593 (+)
Gene ID: k141_6645_15
Type: TC
Location: 17595 - 19322 (+)
Gene ID: k141_6645_16
Type: TC
Location: 19319 - 21163 (+)
Gene ID: k141_6645_17
Type: pfam
Location: 21229 - 21909 (+)
Gene ID: k141_6645_18
Type: TC
Location: 21931 - 23103 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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