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Cluster: CGMR020081_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_14859 k141_14859_9 9131 10528 + 9.B.34.1.4
peptidase k141_14859 k141_14859_10 10504 12357 - C44.UPW
TC k141_14859 k141_14859_11 12394 13767 - 2.A.45.3.1
TC k141_14859 k141_14859_12 14184 15533 + 1.A.26.1.2
TC k141_14859 k141_14859_13 15585 17375 + 8.A.59.2.1
TF k141_14859 k141_14859_14 17403 18932 + HTH_AraC | HTH_AraC
STP k141_14859 k141_14859_15 19034 20422 + SBP_bac_1
TC k141_14859 k141_14859_16 20586 21476 + 3.A.1.1.11
TC k141_14859 k141_14859_17 21479 22312 + 3.A.1.1.18
pfam k141_14859 k141_14859_18 22389 23000 + Hexapep | Mac | Hexapep_2
CAZyme k141_14859 k141_14859_19 23022 26015 + GH2
Gene ID: k141_14859_9
Type: TC
Location: 9131 - 10528 (+)
Gene ID: k141_14859_10
Type: peptidase
Location: 10504 - 12357 (-)
Gene ID: k141_14859_11
Type: TC
Location: 12394 - 13767 (-)
Gene ID: k141_14859_12
Type: TC
Location: 14184 - 15533 (+)
Gene ID: k141_14859_13
Type: TC
Location: 15585 - 17375 (+)
Gene ID: k141_14859_14
Type: TF
Location: 17403 - 18932 (+)
Gene ID: k141_14859_15
Type: STP
Location: 19034 - 20422 (+)
Gene ID: k141_14859_16
Type: TC
Location: 20586 - 21476 (+)
Gene ID: k141_14859_17
Type: TC
Location: 21479 - 22312 (+)
Gene ID: k141_14859_18
Type: pfam
Location: 22389 - 23000 (+)
Gene ID: k141_14859_19
Type: CAZyme
Location: 23022 - 26015 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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