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Cluster: CGMR020081_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_1865 k141_1865_3 1863 3872 + 9.B.18.2.1
pfam k141_1865 k141_1865_4 4116 4676 + NusG
pfam k141_1865 k141_1865_5 4915 6129 + Aminotran_1_2 | DegT_DnrJ_EryC1
TC k141_1865 k141_1865_6 6145 6897 + 9.B.18.1.3
pfam k141_1865 k141_1865_7 6894 7502 + Acetyltransf_1
CAZyme k141_1865 k141_1865_8 7502 8713 + GT4
CAZyme k141_1865 k141_1865_9 8809 9765 + GT2
CAZyme k141_1865 k141_1865_10 9796 10932 + GT4
pfam k141_1865 k141_1865_11 10936 11694 + YdjC
NULL(UNKNOWN) k141_1865 k141_1865_12 11711 12904 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_1865 k141_1865_13 12956 14119 + GT4
Gene ID: k141_1865_3
Type: TC
Location: 1863 - 3872 (+)
Gene ID: k141_1865_4
Type: pfam
Location: 4116 - 4676 (+)
Gene ID: k141_1865_5
Type: pfam
Location: 4915 - 6129 (+)
Gene ID: k141_1865_6
Type: TC
Location: 6145 - 6897 (+)
Gene ID: k141_1865_7
Type: pfam
Location: 6894 - 7502 (+)
Gene ID: k141_1865_8
Type: CAZyme
Location: 7502 - 8713 (+)
Gene ID: k141_1865_9
Type: CAZyme
Location: 8809 - 9765 (+)
Gene ID: k141_1865_10
Type: CAZyme
Location: 9796 - 10932 (+)
Gene ID: k141_1865_11
Type: pfam
Location: 10936 - 11694 (+)
Gene ID: k141_1865_12
Type:
Location: 11711 - 12904 (+)
Gene ID: k141_1865_13
Type: CAZyme
Location: 12956 - 14119 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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