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Cluster: CGMR020081_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_15415 k141_15415_2 662 1777 + 2.A.56.1.6
pfam k141_15415 k141_15415_3 1850 2374 + DctQ
TC k141_15415 k141_15415_4 2374 3678 + 2.A.56.1.5
pfam k141_15415 k141_15415_5 3805 4578 - Glucosamine_iso
pfam k141_15415 k141_15415_6 4639 5379 - Glucosamine_iso
CAZyme k141_15415 k141_15415_7 5415 6599 - CE9
TF k141_15415 k141_15415_8 6857 7945 + LacI
TC k141_15415 k141_15415_9 7963 9060 + 2.A.56.1.2
pfam k141_15415 k141_15415_10 9137 9631 + DctQ
TC k141_15415 k141_15415_11 9628 10932 + 2.A.56.1.5
pfam k141_15415 k141_15415_12 10929 11582 + Lipase_GDSL | Lipase_GDSL_2
TC k141_15415 k141_15415_13 11740 12789 + 2.A.56.1.5
Gene ID: k141_15415_2
Type: TC
Location: 662 - 1777 (+)
Gene ID: k141_15415_3
Type: pfam
Location: 1850 - 2374 (+)
Gene ID: k141_15415_4
Type: TC
Location: 2374 - 3678 (+)
Gene ID: k141_15415_5
Type: pfam
Location: 3805 - 4578 (-)
Gene ID: k141_15415_6
Type: pfam
Location: 4639 - 5379 (-)
Gene ID: k141_15415_7
Type: CAZyme
Location: 5415 - 6599 (-)
Gene ID: k141_15415_8
Type: TF
Location: 6857 - 7945 (+)
Gene ID: k141_15415_9
Type: TC
Location: 7963 - 9060 (+)
Gene ID: k141_15415_10
Type: pfam
Location: 9137 - 9631 (+)
Gene ID: k141_15415_11
Type: TC
Location: 9628 - 10932 (+)
Gene ID: k141_15415_12
Type: pfam
Location: 10929 - 11582 (+)
Gene ID: k141_15415_13
Type: TC
Location: 11740 - 12789 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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