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Cluster: CGMR019857_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_180225 k141_180225_18 18864 22073 - 2.A.6.2.17
TC k141_180225 k141_180225_19 22077 23195 - 2.A.6.2.27
STP k141_180225 k141_180225_20 23306 23962 + TetR_N
pfam k141_180225 k141_180225_21 24101 24754 + RrnaAD | PCMT | Methyltransf_11 | Methyltransf_23 | Methyltransf_25
TC k141_180225 k141_180225_22 24774 26102 + 2.A.6.2.27
CAZyme k141_180225 k141_180225_23 26107 27417 - GT30
pfam k141_180225 k141_180225_24 27462 28367 + Lip_A_acyltrans
pfam k141_180225 k141_180225_25 28358 29671 - Wzy_C
CAZyme k141_180225 k141_180225_26 29668 30771 - GT4
Gene ID: k141_180225_18
Type: TC
Location: 18864 - 22073 (-)
Gene ID: k141_180225_19
Type: TC
Location: 22077 - 23195 (-)
Gene ID: k141_180225_20
Type: STP
Location: 23306 - 23962 (+)
Gene ID: k141_180225_21
Type: pfam
Location: 24101 - 24754 (+)
Gene ID: k141_180225_22
Type: TC
Location: 24774 - 26102 (+)
Gene ID: k141_180225_23
Type: CAZyme
Location: 26107 - 27417 (-)
Gene ID: k141_180225_24
Type: pfam
Location: 27462 - 28367 (+)
Gene ID: k141_180225_25
Type: pfam
Location: 28358 - 29671 (-)
Gene ID: k141_180225_26
Type: CAZyme
Location: 29668 - 30771 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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