Cluster: CGMR019806_CGC10
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 7
- Substrate:
- Genome ID: CGMR019806
- CGC Family ID: CGCFAM_00657
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_107257 | k141_107257_12 | 11761 | 12840 | - | GH177 |
| CAZyme | k141_107257 | k141_107257_13 | 12843 | 14081 | - | GT4 |
| NULL(UNKNOWN) | k141_107257 | k141_107257_14 | 14106 | 14948 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_107257 | k141_107257_15 | 15003 | 15842 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_107257 | k141_107257_16 | 15846 | 16550 | - | 9.B.18.1.2 |
| pfam | k141_107257 | k141_107257_17 | 16551 | 17684 | - | Aminotran_1_2 | DegT_DnrJ_EryC1 |
| NULL(UNKNOWN) | k141_107257 | k141_107257_18 | 17701 | 18651 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_107257 | k141_107257_19 | 18661 | 20517 | - | 9.B.18.2.1 |
| CAZyme | k141_107257 | k141_107257_20 | 20590 | 21765 | - | GT4 |
| pfam | k141_107257 | k141_107257_21 | 21762 | 22907 | - | Glycos_transf_2 |
| CAZyme | k141_107257 | k141_107257_22 | 23042 | 23959 | + | GT11 |
| CAZyme | k141_107257 | k141_107257_23 | 23977 | 25203 | + | GT4 |
| CAZyme | k141_107257 | k141_107257_24 | 25182 | 26147 | - | GT2 |
| CAZyme | k141_107257 | k141_107257_25 | 26148 | 27161 | - | GT2 |
Gene ID: k141_107257_12
Type: CAZyme
Location: 11761 - 12840 (-)
Type: CAZyme
Location: 11761 - 12840 (-)
Gene ID: k141_107257_13
Type: CAZyme
Location: 12843 - 14081 (-)
Type: CAZyme
Location: 12843 - 14081 (-)
Gene ID: k141_107257_14
Type:
Location: 14106 - 14948 (-)
Type:
Location: 14106 - 14948 (-)
Gene ID: k141_107257_15
Type:
Location: 15003 - 15842 (-)
Type:
Location: 15003 - 15842 (-)
Gene ID: k141_107257_16
Type: TC
Location: 15846 - 16550 (-)
Type: TC
Location: 15846 - 16550 (-)
Gene ID: k141_107257_17
Type: pfam
Location: 16551 - 17684 (-)
Type: pfam
Location: 16551 - 17684 (-)
Gene ID: k141_107257_18
Type:
Location: 17701 - 18651 (-)
Type:
Location: 17701 - 18651 (-)
Gene ID: k141_107257_19
Type: TC
Location: 18661 - 20517 (-)
Type: TC
Location: 18661 - 20517 (-)
Gene ID: k141_107257_20
Type: CAZyme
Location: 20590 - 21765 (-)
Type: CAZyme
Location: 20590 - 21765 (-)
Gene ID: k141_107257_21
Type: pfam
Location: 21762 - 22907 (-)
Type: pfam
Location: 21762 - 22907 (-)
Gene ID: k141_107257_22
Type: CAZyme
Location: 23042 - 23959 (+)
Type: CAZyme
Location: 23042 - 23959 (+)
Gene ID: k141_107257_23
Type: CAZyme
Location: 23977 - 25203 (+)
Type: CAZyme
Location: 23977 - 25203 (+)
Gene ID: k141_107257_24
Type: CAZyme
Location: 25182 - 26147 (-)
Type: CAZyme
Location: 25182 - 26147 (-)
Gene ID: k141_107257_25
Type: CAZyme
Location: 26148 - 27161 (-)
Type: CAZyme
Location: 26148 - 27161 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominiventricola
Species
Hominiventricola sp003480725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.