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Cluster: CGMR019806_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_55033 k141_55033_37 44971 46725 + 3.A.1.135.5
TC k141_55033 k141_55033_38 46718 48643 + 3.A.1.135.5
TC k141_55033 k141_55033_39 48729 49610 + 2.A.7.3.52
STP k141_55033 k141_55033_40 49653 50573 - ATPase_2
CAZyme k141_55033 k141_55033_41 50733 51527 + CE4
pfam k141_55033 k141_55033_42 51790 52662 + PDDEXK_2
STP k141_55033 k141_55033_43 52887 54251 + Citrate_synt
TC k141_55033 k141_55033_44 54476 55816 + 3.A.1.1.45
TC k141_55033 k141_55033_45 55916 56767 + 3.A.1.1.45
TC k141_55033 k141_55033_46 56768 57610 + 3.A.1.1.45
TF k141_55033 k141_55033_47 57619 58635 + LacI
TC k141_55033 k141_55033_48 58675 59772 + 3.A.1.1.26
CAZyme k141_55033 k141_55033_49 59809 61332 + GH77
Gene ID: k141_55033_37
Type: TC
Location: 44971 - 46725 (+)
Gene ID: k141_55033_38
Type: TC
Location: 46718 - 48643 (+)
Gene ID: k141_55033_39
Type: TC
Location: 48729 - 49610 (+)
Gene ID: k141_55033_40
Type: STP
Location: 49653 - 50573 (-)
Gene ID: k141_55033_41
Type: CAZyme
Location: 50733 - 51527 (+)
Gene ID: k141_55033_42
Type: pfam
Location: 51790 - 52662 (+)
Gene ID: k141_55033_43
Type: STP
Location: 52887 - 54251 (+)
Gene ID: k141_55033_44
Type: TC
Location: 54476 - 55816 (+)
Gene ID: k141_55033_45
Type: TC
Location: 55916 - 56767 (+)
Gene ID: k141_55033_46
Type: TC
Location: 56768 - 57610 (+)
Gene ID: k141_55033_47
Type: TF
Location: 57619 - 58635 (+)
Gene ID: k141_55033_48
Type: TC
Location: 58675 - 59772 (+)
Gene ID: k141_55033_49
Type: CAZyme
Location: 59809 - 61332 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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