Cluster: CGMR019623_CGC7
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR019623
- CGC Family ID: CGCFAM_07956
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_108443 | k141_108443_78 | 84145 | 85491 | - | 3.A.5.1.1 |
| pfam | k141_108443 | k141_108443_79 | 85516 | 85854 | - | UPF0122 |
| TC | k141_108443 | k141_108443_80 | 85923 | 86918 | - | 9.B.102.7.7 |
| pfam | k141_108443 | k141_108443_81 | 86925 | 88178 | - | PS_pyruv_trans |
| NULL(UNKNOWN) | k141_108443 | k141_108443_82 | 88195 | 90036 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_108443 | k141_108443_83 | 90038 | 90994 | - | GT2 |
| pfam | k141_108443 | k141_108443_84 | 91018 | 92193 | - | UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| STP | k141_108443 | k141_108443_85 | 92209 | 93420 | - | PALP |
| TC | k141_108443 | k141_108443_86 | 93425 | 94369 | - | 3.A.5.1.1 |
| pfam | k141_108443 | k141_108443_87 | 94383 | 97943 | - | SMC_N | SMC_hinge | AAA_21 | AAA_23 |
| pfam | k141_108443 | k141_108443_88 | 97947 | 98645 | - | dsrm | Ribonuclease_3 | Ribonucleas_3_3 |
| TC | k141_108443 | k141_108443_89 | 98733 | 98963 | - | 3.D.1.6.4 |
Gene ID: k141_108443_78
Type: TC
Location: 84145 - 85491 (-)
Type: TC
Location: 84145 - 85491 (-)
Gene ID: k141_108443_79
Type: pfam
Location: 85516 - 85854 (-)
Type: pfam
Location: 85516 - 85854 (-)
Gene ID: k141_108443_80
Type: TC
Location: 85923 - 86918 (-)
Type: TC
Location: 85923 - 86918 (-)
Gene ID: k141_108443_81
Type: pfam
Location: 86925 - 88178 (-)
Type: pfam
Location: 86925 - 88178 (-)
Gene ID: k141_108443_82
Type:
Location: 88195 - 90036 (-)
Type:
Location: 88195 - 90036 (-)
Gene ID: k141_108443_83
Type: CAZyme
Location: 90038 - 90994 (-)
Type: CAZyme
Location: 90038 - 90994 (-)
Gene ID: k141_108443_84
Type: pfam
Location: 91018 - 92193 (-)
Type: pfam
Location: 91018 - 92193 (-)
Gene ID: k141_108443_85
Type: STP
Location: 92209 - 93420 (-)
Type: STP
Location: 92209 - 93420 (-)
Gene ID: k141_108443_86
Type: TC
Location: 93425 - 94369 (-)
Type: TC
Location: 93425 - 94369 (-)
Gene ID: k141_108443_87
Type: pfam
Location: 94383 - 97943 (-)
Type: pfam
Location: 94383 - 97943 (-)
Gene ID: k141_108443_88
Type: pfam
Location: 97947 - 98645 (-)
Type: pfam
Location: 97947 - 98645 (-)
Gene ID: k141_108443_89
Type: TC
Location: 98733 - 98963 (-)
Type: TC
Location: 98733 - 98963 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus
Species
Hominisplanchenecus faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.