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Cluster: CGMR019623_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_121570 k141_121570_19 15553 17286 + 9.B.33.1.1
STP k141_121570 k141_121570_20 17273 18292 + Peripla_BP_1
STP k141_121570 k141_121570_21 18454 19677 + Peripla_BP_1 | Peripla_BP_3
TC k141_121570 k141_121570_22 19815 21311 + 3.A.1.2.3
TC k141_121570 k141_121570_23 21326 22396 + 3.A.1.2.3
NULL(UNKNOWN) k141_121570 k141_121570_24 22665 23021 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_121570 k141_121570_25 23600 29719 + GH2 | GH2
NULL(UNKNOWN) k141_121570 k141_121570_26 29735 29980 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_121570 k141_121570_27 29869 30378 - 2.A.87.3.2
Gene ID: k141_121570_19
Type: TC
Location: 15553 - 17286 (+)
Gene ID: k141_121570_20
Type: STP
Location: 17273 - 18292 (+)
Gene ID: k141_121570_21
Type: STP
Location: 18454 - 19677 (+)
Gene ID: k141_121570_22
Type: TC
Location: 19815 - 21311 (+)
Gene ID: k141_121570_23
Type: TC
Location: 21326 - 22396 (+)
Gene ID: k141_121570_24
Type:
Location: 22665 - 23021 (+)
Gene ID: k141_121570_25
Type: CAZyme
Location: 23600 - 29719 (+)
Gene ID: k141_121570_26
Type:
Location: 29735 - 29980 (+)
Gene ID: k141_121570_27
Type: TC
Location: 29869 - 30378 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_121570_21 vegetarian > vegan 1.07003 0.01582

🧭 Explore Read Mapping of CGC

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