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Cluster: CGMR019623_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_9664 k141_9664_1 108 2399 - GT35
TF k141_9664 k141_9664_2 2540 3397 + HTH_AraC | HTH_AraC
TF k141_9664 k141_9664_3 3448 4473 - LacI
TC k141_9664 k141_9664_4 4762 6951 + 4.A.1.1.11
pfam k141_9664 k141_9664_5 6972 7775 + Exo_endo_phos
CAZyme k141_9664 k141_9664_6 7791 9293 + GH77
TC k141_9664 k141_9664_7 9679 11289 + 3.A.1.5.28
TC k141_9664 k141_9664_8 11347 12363 + 3.A.1.5.25
TC k141_9664 k141_9664_9 12353 13165 + 3.A.1.5.19
TC k141_9664 k141_9664_10 13177 14169 + 3.A.1.5.32
TC k141_9664 k141_9664_11 14162 15052 + 3.A.1.5.2
Gene ID: k141_9664_1
Type: CAZyme
Location: 108 - 2399 (-)
Gene ID: k141_9664_2
Type: TF
Location: 2540 - 3397 (+)
Gene ID: k141_9664_3
Type: TF
Location: 3448 - 4473 (-)
Gene ID: k141_9664_4
Type: TC
Location: 4762 - 6951 (+)
Gene ID: k141_9664_5
Type: pfam
Location: 6972 - 7775 (+)
Gene ID: k141_9664_6
Type: CAZyme
Location: 7791 - 9293 (+)
Gene ID: k141_9664_7
Type: TC
Location: 9679 - 11289 (+)
Gene ID: k141_9664_8
Type: TC
Location: 11347 - 12363 (+)
Gene ID: k141_9664_9
Type: TC
Location: 12353 - 13165 (+)
Gene ID: k141_9664_10
Type: TC
Location: 13177 - 14169 (+)
Gene ID: k141_9664_11
Type: TC
Location: 14162 - 15052 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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