Cluster: CGMR019623_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR019623
- CGC Family ID: CGCFAM_05224
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_86137 | k141_86137_1 | 345 | 3827 | + | GH3 |
| CAZyme | k141_86137 | k141_86137_2 | 4245 | 7376 | + | GH3 |
| pfam | k141_86137 | k141_86137_3 | 7580 | 8968 | + | Lyase_1 | ASL_C2 |
| pfam | k141_86137 | k141_86137_4 | 9093 | 10178 | + | Semialdhyde_dh | Semialdhyde_dhC |
| TC | k141_86137 | k141_86137_5 | 10613 | 11500 | + | 3.A.1.126.1 |
| pfam | k141_86137 | k141_86137_6 | 11493 | 12296 | + | ABC2_membrane_2 |
| TC | k141_86137 | k141_86137_7 | 12312 | 14348 | + | 3.A.7.7.1 |
Gene ID: k141_86137_1
Type: CAZyme
Location: 345 - 3827 (+)
Type: CAZyme
Location: 345 - 3827 (+)
Gene ID: k141_86137_2
Type: CAZyme
Location: 4245 - 7376 (+)
Type: CAZyme
Location: 4245 - 7376 (+)
Gene ID: k141_86137_3
Type: pfam
Location: 7580 - 8968 (+)
Type: pfam
Location: 7580 - 8968 (+)
Gene ID: k141_86137_4
Type: pfam
Location: 9093 - 10178 (+)
Type: pfam
Location: 9093 - 10178 (+)
Gene ID: k141_86137_5
Type: TC
Location: 10613 - 11500 (+)
Type: TC
Location: 10613 - 11500 (+)
Gene ID: k141_86137_6
Type: pfam
Location: 11493 - 12296 (+)
Type: pfam
Location: 11493 - 12296 (+)
Gene ID: k141_86137_7
Type: TC
Location: 12312 - 14348 (+)
Type: TC
Location: 12312 - 14348 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus
Species
Hominisplanchenecus faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.