Cluster: CGMR019477_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR019477
- CGC Family ID: CGCFAM_05431
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_64421 | k141_64421_68 | 70812 | 71678 | - | 3.A.1.15.4 |
| TC | k141_64421 | k141_64421_69 | 71671 | 72561 | - | 3.A.1.15.4 |
| TC | k141_64421 | k141_64421_70 | 72558 | 73448 | - | 3.A.1.15.4 |
| TC | k141_64421 | k141_64421_71 | 73449 | 74360 | - | 3.A.1.15.4 |
| CAZyme | k141_64421 | k141_64421_72 | 74732 | 75391 | + | GH23 |
| TC | k141_64421 | k141_64421_73 | 75385 | 76089 | - | 2.A.95.1.1 |
Gene ID: k141_64421_68
Type: TC
Location: 70812 - 71678 (-)
Type: TC
Location: 70812 - 71678 (-)
Gene ID: k141_64421_69
Type: TC
Location: 71671 - 72561 (-)
Type: TC
Location: 71671 - 72561 (-)
Gene ID: k141_64421_70
Type: TC
Location: 72558 - 73448 (-)
Type: TC
Location: 72558 - 73448 (-)
Gene ID: k141_64421_71
Type: TC
Location: 73449 - 74360 (-)
Type: TC
Location: 73449 - 74360 (-)
Gene ID: k141_64421_72
Type: CAZyme
Location: 74732 - 75391 (+)
Type: CAZyme
Location: 74732 - 75391 (+)
Gene ID: k141_64421_73
Type: TC
Location: 75385 - 76089 (-)
Type: TC
Location: 75385 - 76089 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Providencia
Species
Providencia alcalifaciens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.