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Cluster: CGMR019477_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_113316 k141_113316_66 46061 46906 + 3.A.1.13.1
TC k141_113316 k141_113316_67 46908 47675 + 3.A.1.13.1
STP k141_113316 k141_113316_68 47801 48946 + Aminotran_1_2
CAZyme k141_113316 k141_113316_69 48946 49938 + GT2
pfam k141_113316 k141_113316_70 49938 51923 + Formyl_trans_N | Epimerase | Formyl_trans_C | GDP_Man_Dehyd
pfam k141_113316 k141_113316_71 51923 52816 + Polysacc_deac_1
CAZyme k141_113316 k141_113316_72 52824 54482 + GT83
TC k141_113316 k141_113316_73 54479 54826 + 2.A.7.22.2
TC k141_113316 k141_113316_74 54823 55230 + 2.A.7.22.1
Gene ID: k141_113316_66
Type: TC
Location: 46061 - 46906 (+)
Gene ID: k141_113316_67
Type: TC
Location: 46908 - 47675 (+)
Gene ID: k141_113316_68
Type: STP
Location: 47801 - 48946 (+)
Gene ID: k141_113316_69
Type: CAZyme
Location: 48946 - 49938 (+)
Gene ID: k141_113316_70
Type: pfam
Location: 49938 - 51923 (+)
Gene ID: k141_113316_71
Type: pfam
Location: 51923 - 52816 (+)
Gene ID: k141_113316_72
Type: CAZyme
Location: 52824 - 54482 (+)
Gene ID: k141_113316_73
Type: TC
Location: 54479 - 54826 (+)
Gene ID: k141_113316_74
Type: TC
Location: 54823 - 55230 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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