Cluster: CGMR019477_CGC27
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR019477
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_55147 | k141_55147_60 | 70642 | 71880 | - | 2.A.55.3.2 |
| TF | k141_55147 | k141_55147_61 | 72309 | 72971 | + | GntR |
| TC | k141_55147 | k141_55147_62 | 73369 | 74676 | + | 2.A.23.1.1 |
| pfam | k141_55147 | k141_55147_63 | 75081 | 75368 | - | ABM |
| CAZyme | k141_55147 | k141_55147_64 | 75851 | 76780 | + | GT73 |
Gene ID: k141_55147_60
Type: TC
Location: 70642 - 71880 (-)
Type: TC
Location: 70642 - 71880 (-)
Gene ID: k141_55147_61
Type: TF
Location: 72309 - 72971 (+)
Type: TF
Location: 72309 - 72971 (+)
Gene ID: k141_55147_62
Type: TC
Location: 73369 - 74676 (+)
Type: TC
Location: 73369 - 74676 (+)
Gene ID: k141_55147_63
Type: pfam
Location: 75081 - 75368 (-)
Type: pfam
Location: 75081 - 75368 (-)
Gene ID: k141_55147_64
Type: CAZyme
Location: 75851 - 76780 (+)
Type: CAZyme
Location: 75851 - 76780 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Providencia
Species
Providencia alcalifaciens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.