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Cluster: CGMR019477_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_86007 k141_86007_80 106598 107944 + 2.A.66.1.22
pfam k141_86007 k141_86007_81 108141 109466 + SDH_alpha
TC k141_86007 k141_86007_82 109615 110580 - 9.B.10.1.1
pfam k141_86007 k141_86007_83 110636 110839 - Sel_put
TC k141_86007 k141_86007_84 110941 113094 - 2.A.114.1.10
pfam k141_86007 k141_86007_85 113489 113995 - WG_beta_rep | WG_beta_rep
CAZyme k141_86007 k141_86007_86 114336 115943 + AA3_2
pfam k141_86007 k141_86007_87 115991 117169 - ATP-grasp | ATP-grasp_3 | CPSase_L_D2 | Dala_Dala_lig_C | PurT_C | RS_preATP-grasp-like
TC k141_86007 k141_86007_88 117332 118258 - 2.A.7.7.2
Gene ID: k141_86007_80
Type: TC
Location: 106598 - 107944 (+)
Gene ID: k141_86007_81
Type: pfam
Location: 108141 - 109466 (+)
Gene ID: k141_86007_82
Type: TC
Location: 109615 - 110580 (-)
Gene ID: k141_86007_83
Type: pfam
Location: 110636 - 110839 (-)
Gene ID: k141_86007_84
Type: TC
Location: 110941 - 113094 (-)
Gene ID: k141_86007_85
Type: pfam
Location: 113489 - 113995 (-)
Gene ID: k141_86007_86
Type: CAZyme
Location: 114336 - 115943 (+)
Gene ID: k141_86007_87
Type: pfam
Location: 115991 - 117169 (-)
Gene ID: k141_86007_88
Type: TC
Location: 117332 - 118258 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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