Cluster: CGMR019477_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR019477
- CGC Family ID: CGCFAM_08330
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_127511 | k141_127511_38 | 45534 | 46892 | + | 2.A.61.1.1 |
| TC | k141_127511 | k141_127511_39 | 47203 | 48462 | + | 2.A.42.2.1 |
| STP | k141_127511 | k141_127511_40 | 48846 | 50120 | + | Aminotran_1_2 |
| CAZyme | k141_127511 | k141_127511_41 | 50549 | 52195 | + | GT83 |
| NULL(UNKNOWN) | k141_127511 | k141_127511_42 | 52277 | 52465 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_127511 | k141_127511_43 | 52462 | 55566 | - | 2.A.6.2.32 |
| TC | k141_127511 | k141_127511_44 | 55577 | 56674 | - | 2.A.6.2.32 |
Gene ID: k141_127511_38
Type: TC
Location: 45534 - 46892 (+)
Type: TC
Location: 45534 - 46892 (+)
Gene ID: k141_127511_39
Type: TC
Location: 47203 - 48462 (+)
Type: TC
Location: 47203 - 48462 (+)
Gene ID: k141_127511_40
Type: STP
Location: 48846 - 50120 (+)
Type: STP
Location: 48846 - 50120 (+)
Gene ID: k141_127511_41
Type: CAZyme
Location: 50549 - 52195 (+)
Type: CAZyme
Location: 50549 - 52195 (+)
Gene ID: k141_127511_42
Type:
Location: 52277 - 52465 (-)
Type:
Location: 52277 - 52465 (-)
Gene ID: k141_127511_43
Type: TC
Location: 52462 - 55566 (-)
Type: TC
Location: 52462 - 55566 (-)
Gene ID: k141_127511_44
Type: TC
Location: 55577 - 56674 (-)
Type: TC
Location: 55577 - 56674 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Providencia
Species
Providencia alcalifaciens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.