Cluster: CGMR019477_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: host glycan
- Genome ID: CGMR019477
- CGC Family ID: CGCFAM_00726
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_4912 | k141_4912_48 | 51107 | 52450 | - | 2.A.23.1.3 |
| TF | k141_4912 | k141_4912_49 | 53674 | 54897 | - | MarR |
| CAZyme | k141_4912 | k141_4912_50 | 54905 | 56071 | - | CE9 |
| sulfatase | k141_4912 | k141_4912_51 | 56193 | 56996 | - | S1_9 |
| TC | k141_4912 | k141_4912_52 | 57392 | 59380 | + | 4.A.1.1.2 |
Gene ID: k141_4912_48
Type: TC
Location: 51107 - 52450 (-)
Type: TC
Location: 51107 - 52450 (-)
Gene ID: k141_4912_49
Type: TF
Location: 53674 - 54897 (-)
Type: TF
Location: 53674 - 54897 (-)
Gene ID: k141_4912_50
Type: CAZyme
Location: 54905 - 56071 (-)
Type: CAZyme
Location: 54905 - 56071 (-)
Gene ID: k141_4912_51
Type: sulfatase
Location: 56193 - 56996 (-)
Type: sulfatase
Location: 56193 - 56996 (-)
Gene ID: k141_4912_52
Type: TC
Location: 57392 - 59380 (+)
Type: TC
Location: 57392 - 59380 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Providencia
Species
Providencia alcalifaciens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.