Cluster: CGMR019477_CGC15
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR019477
- CGC Family ID: CGCFAM_01650
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_8486 | k141_8486_78 | 64384 | 65031 | + | 2.A.76.1.5 |
| pfam | k141_8486 | k141_8486_79 | 65118 | 65630 | + | dCMP_cyt_deam_1 | MafB19-deam |
| CAZyme | k141_8486 | k141_8486_80 | 65627 | 67273 | - | GH23 |
| peptidase | k141_8486 | k141_8486_81 | 67542 | 71429 | + | C26.UPW |
| TC | k141_8486 | k141_8486_82 | 71585 | 72625 | - | 3.A.1.20.2 |
| TC | k141_8486 | k141_8486_83 | 72642 | 74720 | - | 3.A.1.20.2 |
| TC | k141_8486 | k141_8486_84 | 74977 | 76008 | - | 3.A.1.20.2 |
| TC | k141_8486 | k141_8486_85 | 76036 | 77361 | - | 2.A.1.4.4 |
Gene ID: k141_8486_78
Type: TC
Location: 64384 - 65031 (+)
Type: TC
Location: 64384 - 65031 (+)
Gene ID: k141_8486_79
Type: pfam
Location: 65118 - 65630 (+)
Type: pfam
Location: 65118 - 65630 (+)
Gene ID: k141_8486_80
Type: CAZyme
Location: 65627 - 67273 (-)
Type: CAZyme
Location: 65627 - 67273 (-)
Gene ID: k141_8486_81
Type: peptidase
Location: 67542 - 71429 (+)
Type: peptidase
Location: 67542 - 71429 (+)
Gene ID: k141_8486_82
Type: TC
Location: 71585 - 72625 (-)
Type: TC
Location: 71585 - 72625 (-)
Gene ID: k141_8486_83
Type: TC
Location: 72642 - 74720 (-)
Type: TC
Location: 72642 - 74720 (-)
Gene ID: k141_8486_84
Type: TC
Location: 74977 - 76008 (-)
Type: TC
Location: 74977 - 76008 (-)
Gene ID: k141_8486_85
Type: TC
Location: 76036 - 77361 (-)
Type: TC
Location: 76036 - 77361 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Providencia
Species
Providencia alcalifaciens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.