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Cluster: CGMR019477_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_58428 k141_58428_5 2953 4752 - CBM34 | GH13_20
TC k141_58428 k141_58428_6 4769 5602 - 3.A.1.1.6
TC k141_58428 k141_58428_7 5605 6894 - 3.A.1.1.6
TC k141_58428 k141_58428_8 6897 8129 - 3.A.1.1.6
TC k141_58428 k141_58428_9 8402 9439 + 1.B.26.1.2
pfam k141_58428 k141_58428_10 9458 10414 + Hexapep | Hexapep
CAZyme k141_58428 k141_58428_11 10499 10987 + CBM69
TC k141_58428 k141_58428_12 11070 12197 + 3.A.1.1.6
TF k141_58428 k141_58428_13 12604 13413 + TrmB
pfam k141_58428 k141_58428_14 13502 15370 + Beta-AFase-like_GH127_cat | Glyco_hydro127M
CAZyme k141_58428 k141_58428_15 15407 18481 + GH38
pfam k141_58428 k141_58428_16 18570 19541 - Lip_A_acyltrans
CAZyme k141_58428 k141_58428_17 19661 20983 - CBM50
TC k141_58428 k141_58428_18 20999 21985 - 3.A.1.15.5
TC k141_58428 k141_58428_19 22010 22729 + 3.A.1.15.5
Gene ID: k141_58428_5
Type: CAZyme
Location: 2953 - 4752 (-)
Gene ID: k141_58428_6
Type: TC
Location: 4769 - 5602 (-)
Gene ID: k141_58428_7
Type: TC
Location: 5605 - 6894 (-)
Gene ID: k141_58428_8
Type: TC
Location: 6897 - 8129 (-)
Gene ID: k141_58428_9
Type: TC
Location: 8402 - 9439 (+)
Gene ID: k141_58428_10
Type: pfam
Location: 9458 - 10414 (+)
Gene ID: k141_58428_11
Type: CAZyme
Location: 10499 - 10987 (+)
Gene ID: k141_58428_12
Type: TC
Location: 11070 - 12197 (+)
Gene ID: k141_58428_13
Type: TF
Location: 12604 - 13413 (+)
Gene ID: k141_58428_14
Type: pfam
Location: 13502 - 15370 (+)
Gene ID: k141_58428_15
Type: CAZyme
Location: 15407 - 18481 (+)
Gene ID: k141_58428_16
Type: pfam
Location: 18570 - 19541 (-)
Gene ID: k141_58428_17
Type: CAZyme
Location: 19661 - 20983 (-)
Gene ID: k141_58428_18
Type: TC
Location: 20999 - 21985 (-)
Gene ID: k141_58428_19
Type: TC
Location: 22010 - 22729 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_58428_16 omnivore > vegetarian 1.22710 0.04898
k141_58428_17 omnivore > vegetarian 1.12406 0.04898
k141_58428_19 omnivore > vegetarian 1.99749 0.00252

🧭 Explore Read Mapping of CGC

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