Cluster: CGMR019140_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR019140
- CGC Family ID: CGCFAM_05429
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_47596 | k141_47596_107 | 110400 | 111662 | + | GH3 |
| TC | k141_47596 | k141_47596_108 | 111696 | 112520 | - | 3.A.1.132.3 |
| TC | k141_47596 | k141_47596_109 | 112834 | 114699 | - | 3.A.1.120.6 |
| pfam | k141_47596 | k141_47596_110 | 114717 | 115304 | - | DUF4093 |
| pfam | k141_47596 | k141_47596_111 | 115297 | 116349 | - | DNA_pol3_delta | DNA_pol3_delta_C |
| TC | k141_47596 | k141_47596_112 | 116346 | 118592 | - | 3.A.11.2.1 |
Gene ID: k141_47596_107
Type: CAZyme
Location: 110400 - 111662 (+)
Type: CAZyme
Location: 110400 - 111662 (+)
Gene ID: k141_47596_108
Type: TC
Location: 111696 - 112520 (-)
Type: TC
Location: 111696 - 112520 (-)
Gene ID: k141_47596_109
Type: TC
Location: 112834 - 114699 (-)
Type: TC
Location: 112834 - 114699 (-)
Gene ID: k141_47596_110
Type: pfam
Location: 114717 - 115304 (-)
Type: pfam
Location: 114717 - 115304 (-)
Gene ID: k141_47596_111
Type: pfam
Location: 115297 - 116349 (-)
Type: pfam
Location: 115297 - 116349 (-)
Gene ID: k141_47596_112
Type: TC
Location: 116346 - 118592 (-)
Type: TC
Location: 116346 - 118592 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.