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Cluster: CGMR018769_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_274253 k141_274253_162 162819 163319 - 2.A.79.1.7
TC k141_274253 k141_274253_163 163336 164097 - 2.A.79.1.4
STP k141_274253 k141_274253_164 164435 165505 - GGDEF
TC k141_274253 k141_274253_165 165901 166959 + 9.B.146.1.4
pfam k141_274253 k141_274253_166 167081 167722 - UPF0029 | DUF1949
pfam k141_274253 k141_274253_167 167891 168754 + DegV
TC k141_274253 k141_274253_168 168929 170113 + 3.A.11.1.1
STP k141_274253 k141_274253_169 170106 170777 + Pribosyltran
pfam k141_274253 k141_274253_170 170844 171416 + Ribosomal_S30AE | Ribosom_S30AE_C
TC k141_274253 k141_274253_171 171718 174249 + 3.A.5.1.3
pfam k141_274253 k141_274253_172 174580 175584 + RF-1 | PCRF
CAZyme k141_274253 k141_274253_173 175959 176912 + CBM50 | CBM50
Gene ID: k141_274253_162
Type: TC
Location: 162819 - 163319 (-)
Gene ID: k141_274253_163
Type: TC
Location: 163336 - 164097 (-)
Gene ID: k141_274253_164
Type: STP
Location: 164435 - 165505 (-)
Gene ID: k141_274253_165
Type: TC
Location: 165901 - 166959 (+)
Gene ID: k141_274253_166
Type: pfam
Location: 167081 - 167722 (-)
Gene ID: k141_274253_167
Type: pfam
Location: 167891 - 168754 (+)
Gene ID: k141_274253_168
Type: TC
Location: 168929 - 170113 (+)
Gene ID: k141_274253_169
Type: STP
Location: 170106 - 170777 (+)
Gene ID: k141_274253_170
Type: pfam
Location: 170844 - 171416 (+)
Gene ID: k141_274253_171
Type: TC
Location: 171718 - 174249 (+)
Gene ID: k141_274253_172
Type: pfam
Location: 174580 - 175584 (+)
Gene ID: k141_274253_173
Type: CAZyme
Location: 175959 - 176912 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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