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Cluster: CGMR018657_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_71843 k141_71843_2 1350 1970 + 2.A.76.1.1
pfam k141_71843 k141_71843_3 2092 2751 + HTH_46
pfam k141_71843 k141_71843_4 2899 4077 + Thiolase_N | ketoacyl-synt | Thiolase_C
TC k141_71843 k141_71843_5 4440 5120 + 1.B.35.1.5
CAZyme k141_71843 k141_71843_6 5361 6539 - PL22 | PL22
pfam k141_71843 k141_71843_7 7149 7910 + adh_short | KR | adh_short_C2
TC k141_71843 k141_71843_8 8187 9476 - 3.A.1.1.11
TC k141_71843 k141_71843_9 9490 10617 - 3.A.1.1.11
TC k141_71843 k141_71843_10 10630 11532 - 3.A.1.1.11
TC k141_71843 k141_71843_11 11525 12415 - 3.A.1.1.11
Gene ID: k141_71843_2
Type: TC
Location: 1350 - 1970 (+)
Gene ID: k141_71843_3
Type: pfam
Location: 2092 - 2751 (+)
Gene ID: k141_71843_4
Type: pfam
Location: 2899 - 4077 (+)
Gene ID: k141_71843_5
Type: TC
Location: 4440 - 5120 (+)
Gene ID: k141_71843_6
Type: CAZyme
Location: 5361 - 6539 (-)
Gene ID: k141_71843_7
Type: pfam
Location: 7149 - 7910 (+)
Gene ID: k141_71843_8
Type: TC
Location: 8187 - 9476 (-)
Gene ID: k141_71843_9
Type: TC
Location: 9490 - 10617 (-)
Gene ID: k141_71843_10
Type: TC
Location: 10630 - 11532 (-)
Gene ID: k141_71843_11
Type: TC
Location: 11525 - 12415 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_71843_7 vegetarian > vegan 1.08619 0.03071
k141_71843_8 vegetarian > omnivore 1.92540 0.02456
k141_71843_8 vegetarian > vegan 1.40319 0.03071
k141_71843_10 vegetarian > omnivore 1.34746 0.02456

🧭 Explore Read Mapping of CGC

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