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Cluster: CGMR018657_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_108890 k141_108890_47 52495 52698 - 2.A.64.1.1
pfam k141_108890 k141_108890_48 52825 53613 - CN_hydrolase
TC k141_108890 k141_108890_49 53696 54079 + 1.A.43.1.1
TF k141_108890 k141_108890_50 54309 54518 - CSD
pfam k141_108890 k141_108890_51 54709 55287 - PagP
TC k141_108890 k141_108890_52 55749 57110 + 2.A.61.1.1
pfam k141_108890 k141_108890_53 57218 58024 + Ribonuclease_T2
NULL(UNKNOWN) k141_108890 k141_108890_54 58043 58324 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_108890 k141_108890_55 58410 60086 - GH13_31
CAZyme k141_108890 k141_108890_56 60086 61741 - GH13_31
TC k141_108890 k141_108890_57 61751 62866 - 3.A.1.1.12
TC k141_108890 k141_108890_58 62870 63715 - 3.A.1.1.12
TC k141_108890 k141_108890_59 63715 64668 - 3.A.1.1.12
TC k141_108890 k141_108890_60 64885 66150 - 3.A.1.1.12
TC k141_108890 k141_108890_61 66549 67925 + 2.A.8.1.7
Gene ID: k141_108890_47
Type: TC
Location: 52495 - 52698 (-)
Gene ID: k141_108890_48
Type: pfam
Location: 52825 - 53613 (-)
Gene ID: k141_108890_49
Type: TC
Location: 53696 - 54079 (+)
Gene ID: k141_108890_50
Type: TF
Location: 54309 - 54518 (-)
Gene ID: k141_108890_51
Type: pfam
Location: 54709 - 55287 (-)
Gene ID: k141_108890_52
Type: TC
Location: 55749 - 57110 (+)
Gene ID: k141_108890_53
Type: pfam
Location: 57218 - 58024 (+)
Gene ID: k141_108890_54
Type:
Location: 58043 - 58324 (-)
Gene ID: k141_108890_55
Type: CAZyme
Location: 58410 - 60086 (-)
Gene ID: k141_108890_56
Type: CAZyme
Location: 60086 - 61741 (-)
Gene ID: k141_108890_57
Type: TC
Location: 61751 - 62866 (-)
Gene ID: k141_108890_58
Type: TC
Location: 62870 - 63715 (-)
Gene ID: k141_108890_59
Type: TC
Location: 63715 - 64668 (-)
Gene ID: k141_108890_60
Type: TC
Location: 64885 - 66150 (-)
Gene ID: k141_108890_61
Type: TC
Location: 66549 - 67925 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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