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Cluster: CGMR018657_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_70238 k141_70238_5 8845 9570 + GT51
TC k141_70238 k141_70238_6 9582 9854 - 8.A.8.1.5
pfam k141_70238 k141_70238_7 9851 10705 - RapZ-like_N | PapZ_C
TC k141_70238 k141_70238_8 10770 11255 - 4.A.2.1.7
pfam k141_70238 k141_70238_9 11338 11625 - Ribosomal_S30AE
pfam k141_70238 k141_70238_10 11648 13087 - Sigma54_AID | Sigma54_DBD | Sigma54_CBD
TC k141_70238 k141_70238_11 13183 13908 - 1.B.42.1.2
TC k141_70238 k141_70238_12 13915 14472 - 1.B.42.1.2
TC k141_70238 k141_70238_13 14441 15016 - 1.B.42.1.2
pfam k141_70238 k141_70238_14 15013 15579 - Hydrolase_3
STP k141_70238 k141_70238_15 15595 16581 - CBS | CBS | SIS
TC k141_70238 k141_70238_16 16596 17573 - 2.A.19.5.1
TC k141_70238 k141_70238_17 17807 18622 + 3.A.1.27.3
TC k141_70238 k141_70238_18 18630 19412 + 3.A.1.27.3
TC k141_70238 k141_70238_19 19416 19967 + 3.A.1.27.3
TC k141_70238 k141_70238_20 19983 20618 + 3.A.1.27.3
TC k141_70238 k141_70238_21 20618 20920 + 3.A.1.27.3
Gene ID: k141_70238_5
Type: CAZyme
Location: 8845 - 9570 (+)
Gene ID: k141_70238_6
Type: TC
Location: 9582 - 9854 (-)
Gene ID: k141_70238_7
Type: pfam
Location: 9851 - 10705 (-)
Gene ID: k141_70238_8
Type: TC
Location: 10770 - 11255 (-)
Gene ID: k141_70238_9
Type: pfam
Location: 11338 - 11625 (-)
Gene ID: k141_70238_10
Type: pfam
Location: 11648 - 13087 (-)
Gene ID: k141_70238_11
Type: TC
Location: 13183 - 13908 (-)
Gene ID: k141_70238_12
Type: TC
Location: 13915 - 14472 (-)
Gene ID: k141_70238_13
Type: TC
Location: 14441 - 15016 (-)
Gene ID: k141_70238_14
Type: pfam
Location: 15013 - 15579 (-)
Gene ID: k141_70238_15
Type: STP
Location: 15595 - 16581 (-)
Gene ID: k141_70238_16
Type: TC
Location: 16596 - 17573 (-)
Gene ID: k141_70238_17
Type: TC
Location: 17807 - 18622 (+)
Gene ID: k141_70238_18
Type: TC
Location: 18630 - 19412 (+)
Gene ID: k141_70238_19
Type: TC
Location: 19416 - 19967 (+)
Gene ID: k141_70238_20
Type: TC
Location: 19983 - 20618 (+)
Gene ID: k141_70238_21
Type: TC
Location: 20618 - 20920 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_70238_6 vegetarian > omnivore 3.06919 0.02456
k141_70238_6 vegetarian > vegan 3.02175 0.01479
k141_70238_7 vegetarian > omnivore 1.24688 0.02456
k141_70238_7 vegetarian > vegan 2.64362 0.01479
k141_70238_8 vegetarian > omnivore 1.04844 0.02486
k141_70238_8 vegetarian > vegan 1.88712 0.03071

🧭 Explore Read Mapping of CGC

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