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Cluster: CGMR018657_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_32594 k141_32594_11 11292 12764 - 3.A.1.5.24
TF k141_32594 k141_32594_12 12836 13627 - HTH_1
TC k141_32594 k141_32594_13 13756 13905 + 2.A.6.2.49
TC k141_32594 k141_32594_14 14049 14825 + 3.A.1.8.1
TC k141_32594 k141_32594_15 14822 15514 + 3.A.1.8.1
TC k141_32594 k141_32594_16 15514 16572 + 3.A.1.8.1
pfam k141_32594 k141_32594_17 16569 17387 - Hydrolase | S6PP | Hydrolase_3
pfam k141_32594 k141_32594_18 17539 18540 + Lactonase
CAZyme k141_32594 k141_32594_19 18727 20034 - CE8
Gene ID: k141_32594_11
Type: TC
Location: 11292 - 12764 (-)
Gene ID: k141_32594_12
Type: TF
Location: 12836 - 13627 (-)
Gene ID: k141_32594_13
Type: TC
Location: 13756 - 13905 (+)
Gene ID: k141_32594_14
Type: TC
Location: 14049 - 14825 (+)
Gene ID: k141_32594_15
Type: TC
Location: 14822 - 15514 (+)
Gene ID: k141_32594_16
Type: TC
Location: 15514 - 16572 (+)
Gene ID: k141_32594_17
Type: pfam
Location: 16569 - 17387 (-)
Gene ID: k141_32594_18
Type: pfam
Location: 17539 - 18540 (+)
Gene ID: k141_32594_19
Type: CAZyme
Location: 18727 - 20034 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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