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Cluster: CGMR018657_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_177345 k141_177345_75 80897 81979 - 3.A.1.1.46
pfam k141_177345 k141_177345_76 81995 82672 - Hydrolase | HAD | HAD_2
CAZyme k141_177345 k141_177345_77 82669 84912 - GH65
CAZyme k141_177345 k141_177345_78 84909 85961 - GH179
pfam k141_177345 k141_177345_79 85977 86765 - AP_endonuc_2
pfam k141_177345 k141_177345_80 86784 87833 - ADH_zinc_N
TC k141_177345 k141_177345_81 87859 88701 - 3.A.1.1.46
TC k141_177345 k141_177345_82 88688 89569 - 3.A.1.1.46
TC k141_177345 k141_177345_83 89593 90885 - 3.A.1.1.46
CAZyme k141_177345 k141_177345_84 90897 92612 - GH13_18
Gene ID: k141_177345_75
Type: TC
Location: 80897 - 81979 (-)
Gene ID: k141_177345_76
Type: pfam
Location: 81995 - 82672 (-)
Gene ID: k141_177345_77
Type: CAZyme
Location: 82669 - 84912 (-)
Gene ID: k141_177345_78
Type: CAZyme
Location: 84909 - 85961 (-)
Gene ID: k141_177345_79
Type: pfam
Location: 85977 - 86765 (-)
Gene ID: k141_177345_80
Type: pfam
Location: 86784 - 87833 (-)
Gene ID: k141_177345_81
Type: TC
Location: 87859 - 88701 (-)
Gene ID: k141_177345_82
Type: TC
Location: 88688 - 89569 (-)
Gene ID: k141_177345_83
Type: TC
Location: 89593 - 90885 (-)
Gene ID: k141_177345_84
Type: CAZyme
Location: 90897 - 92612 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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