Cluster: CGMR018657_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR018657
- CGC Family ID: CGCFAM_03742
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_85173 | k141_85173_5 | 6050 | 6817 | + | 3.A.1.3.25 |
| TC | k141_85173 | k141_85173_6 | 6891 | 7655 | + | 3.A.1.3.17 |
| TC | k141_85173 | k141_85173_7 | 7642 | 8364 | + | 3.A.1.3.25 |
| CAZyme | k141_85173 | k141_85173_8 | 8480 | 9562 | + | GH103 |
Gene ID: k141_85173_5
Type: TC
Location: 6050 - 6817 (+)
Type: TC
Location: 6050 - 6817 (+)
Gene ID: k141_85173_6
Type: TC
Location: 6891 - 7655 (+)
Type: TC
Location: 6891 - 7655 (+)
Gene ID: k141_85173_7
Type: TC
Location: 7642 - 8364 (+)
Type: TC
Location: 7642 - 8364 (+)
Gene ID: k141_85173_8
Type: CAZyme
Location: 8480 - 9562 (+)
Type: CAZyme
Location: 8480 - 9562 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Cronobacter
Species
Cronobacter sakazakii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_85173_6 | vegetarian > vegan | 1.81856 | 0.03071 |