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Cluster: CGMR018657_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_12039 k141_12039_84 97647 100178 + GT51
TC k141_12039 k141_12039_85 100453 102645 + 1.B.14.1.2
TC k141_12039 k141_12039_86 102591 103490 + 3.A.1.14.3
TC k141_12039 k141_12039_87 103490 104386 + 3.A.1.14.3
TC k141_12039 k141_12039_88 104383 106368 + 3.A.1.14.3
pfam k141_12039 k141_12039_89 106580 107860 - Aminotran_3
TC k141_12039 k141_12039_90 108032 109435 + 2.A.49.5.5
pfam k141_12039 k141_12039_91 109517 109861 + Fe-S_biosyn
TC k141_12039 k141_12039_92 109915 110535 - 1.A.62.2.2
TC k141_12039 k141_12039_93 110552 111352 - 3.A.1.13.1
Gene ID: k141_12039_84
Type: CAZyme
Location: 97647 - 100178 (+)
Gene ID: k141_12039_85
Type: TC
Location: 100453 - 102645 (+)
Gene ID: k141_12039_86
Type: TC
Location: 102591 - 103490 (+)
Gene ID: k141_12039_87
Type: TC
Location: 103490 - 104386 (+)
Gene ID: k141_12039_88
Type: TC
Location: 104383 - 106368 (+)
Gene ID: k141_12039_89
Type: pfam
Location: 106580 - 107860 (-)
Gene ID: k141_12039_90
Type: TC
Location: 108032 - 109435 (+)
Gene ID: k141_12039_91
Type: pfam
Location: 109517 - 109861 (+)
Gene ID: k141_12039_92
Type: TC
Location: 109915 - 110535 (-)
Gene ID: k141_12039_93
Type: TC
Location: 110552 - 111352 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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