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Cluster: CGMR018657_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_12039 k141_12039_66 78023 78349 - 8.A.2.1.3
CAZyme k141_12039 k141_12039_67 79101 80663 + AA1
pfam k141_12039 k141_12039_68 80941 83337 - PQQ | PQQ | PQQ | PQQ | PQQ | PQQ | PQQ_2
STP k141_12039 k141_12039_69 83530 84066 + Pribosyltran
TC k141_12039 k141_12039_70 84121 84783 - 2.A.53.3.8
TC k141_12039 k141_12039_71 84892 85818 + 3.A.1.105.17
TC k141_12039 k141_12039_72 85815 86585 + 3.A.1.105.17
CAZyme k141_12039 k141_12039_73 86750 87997 + CE4
Gene ID: k141_12039_66
Type: TC
Location: 78023 - 78349 (-)
Gene ID: k141_12039_67
Type: CAZyme
Location: 79101 - 80663 (+)
Gene ID: k141_12039_68
Type: pfam
Location: 80941 - 83337 (-)
Gene ID: k141_12039_69
Type: STP
Location: 83530 - 84066 (+)
Gene ID: k141_12039_70
Type: TC
Location: 84121 - 84783 (-)
Gene ID: k141_12039_71
Type: TC
Location: 84892 - 85818 (+)
Gene ID: k141_12039_72
Type: TC
Location: 85815 - 86585 (+)
Gene ID: k141_12039_73
Type: CAZyme
Location: 86750 - 87997 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_12039_72 vegetarian > omnivore 1.22209 0.03855

🧭 Explore Read Mapping of CGC

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