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Cluster: CGMR018611_CGC89

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_60561 k141_60561_30 47052 48527 + 8.A.59.2.1
TF k141_60561 k141_60561_31 48559 49875 + HTH_AraC | HTH_AraC
TC k141_60561 k141_60561_32 49865 50899 + 3.A.1.2.4
TC k141_60561 k141_60561_33 51572 52810 + 3.A.1.2.22
TC k141_60561 k141_60561_34 52907 54439 + 3.A.1.2.5
TC k141_60561 k141_60561_35 54452 55648 + 3.A.1.2.5
CAZyme k141_60561 k141_60561_36 55825 62361 + CBM35 | CBM35 | CBM6 | GH31
TF k141_60561 k141_60561_37 62549 62986 + MarR
TC k141_60561 k141_60561_38 63109 64875 + 3.A.1.135.5
TC k141_60561 k141_60561_39 64853 66751 + 3.A.1.135.5
CAZyme k141_60561 k141_60561_40 66919 73452 + CBM66 | CBM66 | GH2
TC k141_60561 k141_60561_41 73632 75416 + 8.A.59.2.1
Gene ID: k141_60561_30
Type: TC
Location: 47052 - 48527 (+)
Gene ID: k141_60561_31
Type: TF
Location: 48559 - 49875 (+)
Gene ID: k141_60561_32
Type: TC
Location: 49865 - 50899 (+)
Gene ID: k141_60561_33
Type: TC
Location: 51572 - 52810 (+)
Gene ID: k141_60561_34
Type: TC
Location: 52907 - 54439 (+)
Gene ID: k141_60561_35
Type: TC
Location: 54452 - 55648 (+)
Gene ID: k141_60561_36
Type: CAZyme
Location: 55825 - 62361 (+)
Gene ID: k141_60561_37
Type: TF
Location: 62549 - 62986 (+)
Gene ID: k141_60561_38
Type: TC
Location: 63109 - 64875 (+)
Gene ID: k141_60561_39
Type: TC
Location: 64853 - 66751 (+)
Gene ID: k141_60561_40
Type: CAZyme
Location: 66919 - 73452 (+)
Gene ID: k141_60561_41
Type: TC
Location: 73632 - 75416 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Robinsoniella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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