Cluster: CGMR018611_CGC85
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR018611
- CGC Family ID: CGCFAM_01405
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_15004 | k141_15004_16 | 19921 | 21717 | + | 8.A.59.2.1 |
| NULL(UNKNOWN) | k141_15004 | k141_15004_17 | 21707 | 21838 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | k141_15004 | k141_15004_18 | 21847 | 23325 | + | HTH_AraC | HTH_AraC |
| TC | k141_15004 | k141_15004_19 | 23406 | 24761 | + | 3.A.1.1.44 |
| TC | k141_15004 | k141_15004_20 | 24778 | 25668 | + | 3.A.1.1.42 |
| TC | k141_15004 | k141_15004_21 | 25668 | 26495 | + | 3.A.1.1.28 |
| CAZyme | k141_15004 | k141_15004_22 | 26534 | 28579 | + | GH151 |
Gene ID: k141_15004_16
Type: TC
Location: 19921 - 21717 (+)
Type: TC
Location: 19921 - 21717 (+)
Gene ID: k141_15004_17
Type:
Location: 21707 - 21838 (+)
Type:
Location: 21707 - 21838 (+)
Gene ID: k141_15004_18
Type: TF
Location: 21847 - 23325 (+)
Type: TF
Location: 21847 - 23325 (+)
Gene ID: k141_15004_19
Type: TC
Location: 23406 - 24761 (+)
Type: TC
Location: 23406 - 24761 (+)
Gene ID: k141_15004_20
Type: TC
Location: 24778 - 25668 (+)
Type: TC
Location: 24778 - 25668 (+)
Gene ID: k141_15004_21
Type: TC
Location: 25668 - 26495 (+)
Type: TC
Location: 25668 - 26495 (+)
Gene ID: k141_15004_22
Type: CAZyme
Location: 26534 - 28579 (+)
Type: CAZyme
Location: 26534 - 28579 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.